Cryptococcus gattii: CGB_A8650W
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Entry
CGB_A8650W CDS
T02232
Name
(RefSeq) regulation of transcription from Pol II promoter-related protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_A8650W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_A8650W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CGB_A8650W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_26
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
10188333
NCBI-ProteinID:
XP_003191709
UniProt:
E6QYN0
LinkDB
All DBs
Position
A:join(1769023..1769331,1769509..1770208,1770264..1771025,1771194..1771300,1771371..1773809,1773860..1774009,1774062..1774562)
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AA seq
1655 aa
AA seq
DB search
MQSTPGQGQPQVQSPPPLLPLLPASQYAHGGRGQAQGFPPPQPAYAGDGIGRASSAGTGT
GTGAAGAAGAAGAERVKEKRRSGFGWLGGKKKDKEKEEREKINNRPRPSSFSVDRPSTQS
QTRAVPASASQAFPQSPPPQTPLQPQPQPQPQHATRPFAQHQRPSPPPGQPLRALSASAE
QGAQAYEGQRSHSLDLGHMQQQQQGEYRSSISSGQGKGSPLAPHIPRSASMPMQPPAAGT
TPNGGSGSPRRGSSFVNPPQPDTAGPANASQADMDRFRSIVDLIAIQPQKTYVTSPPELE
MILARTSGGGQPKQGQPGSATNDWDAVWLQLSGISLSMWSMKETRAAAAKGDKVPPTYFN
ITDSSLELLAPLPPPPHRPNSHPHHFVFSLNTAGSNRLLFSCPTERDLARWATGLRLAAW
ERARLEEIYTGHLVQSGGREPPVEVGKGRSRMEGWVRVRVMGGTEWRRLWLVLSTPREGK
EEEKKSKRRSFFGMGGREEEQVPSEPNTGMVMASFYTEQRTSKNKTSVVPILTITNVSQT
YAVFPERLEVMSQSNLFKVVGRISGEMVTVEGRLRDSGWALLMPEHPENAGFHDAFKLYG
RPEKYVWDIKDPKGLFFAYPQGQDRLNLFLDIEEALHGDLRVTTLAGVRSKFVSLVHRRQ
HSNQKRPKDENTDQFSGENEDQGFQRQDGNFRLPPLSFNEASQDPNMPRSLTPITERTDV
ASRQNSTRTSNSAFTVVGLGGAPGTGGSGDRKTSGTSSKHGSQSSNKHEEHERDRLPQVA
NDIHQVFGPLTEEPGEAYSTSGSNSIATPRVVPAPLPGGGGGIQRGGIPSSSVESTSVYS
QDTGVTPHQSAKPSPPPPIPSAPPLSAGPEEQTSDEGLPHPSVLTFPIARGQKSPLGQPV
IANPDPPSASPPTPQPPAKQQLPVQPATTSQVLSPTPRKASSSGDTVPHGMELREEPAAM
YLMNMVEETTPVPKPLVPKAVSPQRPTINTNFDGQGGLLNPITKPVTGGNQEASAVGKKD
ALGRKPSGARALPAKRSGGTRMETIEDRSAGSQIQEDGQTQTQAAASAEPSRTKVSSQTP
QVDLGDDVSSYMNYADNPSPVKPKTEPLQVTKPVAAATKTVSPPQEEIRSSFAPSKAAVE
RRAKAEQTAREQEMAKRMPGGGKRTVNNVNTMSGFESSDEESEEESEEDSPMTQKRQEQP
LSRTASKASEQAAPNAPQRTTSINARALPPVPRIQQPPEVRSPAENNEPRTRRDSQFSQS
AGQYDSRASQFMERPRPASRTPSPGSGNVANGRPISTLVYNNNGGSYPIPGPRHSPANNA
PPATRQTVWNANFSTEHGMPEQNKSGKFVELEEPSVQLTKAFAPHGLLQAGMQDKEDRSA
KKQEELARETGSSLINVAAKPPPPQTGLVGAVAAHERDRKNAGGIGATLTDREREKRLVE
DKQREIERLQKQQMGQFGGDMYPQNFGYPMSPGPMGMGMNMPMMNMGYPGQMNPYVQQQA
MLAAQMAYQQTMMAMSQAGSQAGDFPDRTQSSSQLRSRQQPGADGRSISPTGSMGGPTSP
PPMGVPSFYGYPQGMGMSPQMGMGGMGMPPMQMPWMMSPGAMWGMATPPTGPGSPMVQPR
YDYMQSGTAGMGSESSSARTKNRGSSGEDLGQRVN
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaccccgggccaaggacaaccacaagtccaatcaccacccccgttgctaccg
ctgctgccggcctcgcaatacgcgcacggtggtcgaggccaggcgcaggggtttccgcct
cctcagccggcatatgccggcgatggtattggacgagcgagcagtgcgggtacggggacg
gggacgggtgcggcgggtgcggcgggtgcggcgggtgcggagagagtaaaggagaagaga
cggagtgggtttggatggctaggcgggaagaaaaaggacaaggaaaaggaggagcgggaa
aagatcaataaccgtccccgcccctcgtccttttccgtcgaccgcccgtctacccagtcg
cagacacgtgccgtccccgcctctgcctcccaagcgttcccccagtcccccccgccgcag
acgcccctacagccccagccccagccccagccgcaacacgcaacccggccattcgcacag
caccagcggccgtcgcctccgcccggacagcccctgcgcgccctgtcggcaagcgcggag
cagggggcccaagcgtacgagggccagcgatcacacagcctcgatctcggccacatgcag
cagcagcagcagggcgagtacaggagcagcatcagcagcgggcaggggaaaggatctccg
ctcgcaccgcacataccccgttcagcctccatgccgatgcagccgcccgcagccggcacc
acacccaatggcggctcgggctccccccgtcggggatcgtcgtttgtgaatccgccgcag
cctgacacagctggtcccgcgaacgcgagccaggccgacatggacaggttcaggtcgata
gtagacttgatcgccatccagccgcaaaagacctatgtcaccagtccgccagagctggaa
atgatccttgcgaggacgagcgggggaggacagccaaagcagggccagcccgggagtgcg
acaaatgactgggatgccgtctggctccagctgtccggcatttctctatcaatgtggtct
atgaaggaaacacgggctgctgctgccaagggcgacaaggtgcccccgacctactttaac
attaccgactcgtctcttgagctcctcgctccccttcctccgcctcctcaccgaccaaat
tcacatccccaccactttgtcttttctctcaatacagctggctccaatcggctgctattc
tcttgcccgacagaacgggatctcgcgcggtgggcgacaggtctccgactagccgcgtgg
gaacgcgcgaggttggaagaaatctacaccggtcatctcgttcaatcgggcgggcgcgag
ccccctgttgaagttggtaaaggccgatcgcggatggaaggatgggtcagagtccgagtt
atgggcgggacagagtggcggcgtctttggctggtgttgagtacaccaagagaaggcaag
gaagaagagaaaaagtccaagcgaagaagtttctttgggatgggaggcagagaagaagag
caggtcccttcagaaccaaataccggtatggtcatggccagcttctatacagaacagagg
acatcgaagaacaagaccagtgtggtacccattttgacaataaccaacgtctcgcaaacc
tatgccgtcttccccgaaaggctcgaggtcatgtctcaatccaacttgttcaaggtggtc
gggcggataagcggggagatggtcaccgtggaaggacgtcttcgagattctggttgggca
cttctcatgcccgaacaccctgagaacgcaggtttccacgatgcgttcaagctttatggc
agacctgaaaagtacgtttgggatatcaaagacccaaaaggtctttttttcgcttatcct
caaggacaagatcgccttaatttattcttggatatcgaggaagctctccatggcgatctc
cgcgtaaccacgctcgctggcgttcggtccaagtttgtctcgctcgttcatcgacgccag
cactcgaaccaaaaacggcccaaagacgagaatactgatcagttttcgggcgaaaatgag
gatcaaggattccaacggcaagacggcaactttagattaccgcctttatcgttcaatgaa
gcgtctcaggatccaaacatgcccaggtctcttacacctataaccgagcgtacggatgtc
gccagtagacaaaatagtacgcgtacttccaattcagcattcaccgtcgttggtcttggt
ggtgcccccggcactggaggatctggcgatcgaaaaaccagtgggactagctccaagcat
ggaagtcaatccagcaacaagcatgaagagcacgagagagatagattaccgcaggtggcg
aatgatatccatcaggtgtttggtcccctgacggaagaacctggtgaagcgtactcaacc
tctgggtccaattcgattgctacccctcgcgttgttcctgcgcctttgccaggtggtggc
ggcggtattcaacggggcggcattccatcgtcttcagtagagtccacttcggtgtactct
caggatacaggggtcacgccgcatcaaagcgccaagccttccccgccaccccccataccc
tctgctcctcccttatcggctgggcctgaggagcagactagtgatgaaggcttgccacat
ccgtctgtcctcactttccccatagctcgcggtcaaaagtctcctcttggtcaacctgtg
attgcaaatcccgatccgcctagcgcttcaccgcctactcctcaaccgccggcgaaacag
cagcttccagttcaacctgctactacttcgcaagtgctttctcctactccacgcaaagcc
tcctcctccggcgataccgtcccacatggaatggagctaagagaagagcctgcggcgatg
tacttgatgaatatggttgaagagacgacacctgtgcctaaacctctggtgcccaaagct
gtttctcctcaaagacctacaatcaataccaactttgatggtcaaggtggacttttaaac
cctatcacaaagcctgtcacaggtgggaaccaagaggcttcggctgttgggaagaaggac
gcactggggaggaaaccctcgggtgcacgagcattacccgcaaaaagaagcgggggaact
cgaatggaaaccattgaggatcggtctgccggttctcagattcaggaggatggacagaca
cagacgcaggctgcagcatcagctgagccctctcgtacgaaagtgtcttcccaaactcct
caagtcgatctgggagatgacgtttcttcctatatgaactatgcggacaacccttccccc
gtcaaaccaaagacggaacctttgcaagtcactaagcccgtggcagcggccaccaaaaca
gtatctcctcctcaagaagagattcgttcaagctttgcaccttccaaagccgcagtggaa
aggcgagccaaagcggagcagactgcgagggaacaggagatggctaagcgtatgcctggt
ggtggaaagaggacggtgaataatgtgaacacgatgtctgggtttgaaagctcggatgag
gaatcggaagaggaaagtgaagaagactctcctatgacgcaaaagagacaagagcaacct
ctttctcgtactgcgtcaaaggcgtctgagcaagcagctcccaacgccccccaacgtacg
acatcgatcaatgccagagctttgccccctgtgccaaggatacagcagccgccagaggtc
agatcgcctgctgaaaataacgagccacgtacgagacgggacagtcagtttagtcagtct
gcaggtcagtatgactcccgtgccagccagttcatggagcgccctcgtcctgcctctcga
actcccagtcctggcagtggtaatgttgcgaatggacgacctatctcgacgctcgtctac
aacaataatggcggatcttaccccattcccggccctcgtcattcacctgcgaataatgcc
ccacctgctactcgtcaaacagtttggaatgccaacttctccactgagcacggtatgcct
gagcagaacaagtctggcaaatttgtggagctagaggaaccttccgttcagctcactaaa
gctttcgcgccacatggattgttgcaggctggtatgcaagataaggaagaccgctctgcg
aagaagcaagaagagctggcaagagagactggtagcagcttgatcaatgtcgccgccaaa
cctcctccccctcaaactgggctggttggtgccgttgccgctcatgaaagggacaggaaa
aatgctggtggtatcggggcgaccttgacagaccgagaaagggaaaagaggctagtcgag
gacaaacaaagagagattgaaagacttcagaaacagcaaatgggacagttcggtggagac
atgtaccctcagaactttggctatcctatgagtcccggccctatgggtatgggtatgaac
atgcccatgatgaacatgggataccccggacagatgaacccttatgtccagcaacaggcc
atgctagctgcccaaatggcgtatcagcagaccatgatggctatgtctcaggcgggatct
caagcaggagatttccccgaccgaactcagtcttcttcccaacttcgctctcgtcaacag
ccaggtgcagatgggcgttcaatatctccgactggcagcatgggcggaccgacatccccc
ccgcctatgggtgttccatccttttatggctacccgcagggaatgggcatgtcccctcaa
atgggtatgggtggtatgggtatgccacccatgcagatgccctggatgatgtctcctggc
gctatgtggggcatggccacccctccgactggaccaggaagtcccatggttcagccgagg
tatgattatatgcagtcaggaaccgcaggaatgggaagcgaatcaagcagtgcgagaacc
aagaatagaggtagtagcggtgaagatcttggtcagcgtgtgaattaa
DBGET
integrated database retrieval system
