Cryptococcus gattii: CGB_A9270W
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Entry
CGB_A9270W CDS
T02232
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_A9270W
03041 Spliceosome [BR:
cgi03041
]
CGB_A9270W
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_A9270W
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGB_A9270W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CGB_A9270W
mRNA cycle factors
Common to processing body (P body) and stress granule
CGB_A9270W
Spliceosome [BR:
cgi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CGB_A9270W
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CGB_A9270W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
10188523
NCBI-ProteinID:
XP_003191751
UniProt:
E6QYR1
LinkDB
All DBs
Position
A:join(1867093..1867132,1867182..1867543,1867600..1869132)
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AA seq
644 aa
AA seq
DB search
MAATDVNGLASQMNSVNLNGAAQKPQKPAYVPPHLRNRAAPPAAAPPAAPAAYRPSPTGL
PTPATTPPTRHSVPVALSEDDVSGWGAQPRVRKTFEHGAPPGFGSWKNGQHVVGARNTRM
EKEMYGEVGDGLHQSTGINFDKYADIPVEVSGKGVPEPVTEFTNPPINPVLLENVKYARY
TTPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSALFTYGPSAPPVEQDTGYGY
RRTKKVYPTALVLAPTRELVSQIHEEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDL
LSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLDRQTL
MFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLLLAEQ
SGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQREREAALYAFKSGRAPILVATA
VAARGLDIPNVTHVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNSNIGKDLIEL
LKEANQEVPQWLVEISSERSFGGGGGGGGGYRGGRGRSTGGGGGGRMGGRDMRQGGGGGG
GGYGGGGYGGGARTGGGYGGGGGASWGNGGGFPPAGGDSGASWW
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaccgatgtcaatggactcgcgtcccaaatgaactccgttaaccttaacggt
gccgctcagaagcctcagaaacctgcctacgtccctcctcacttgaggaaccgtgccgct
cctcccgccgctgcccctcctgcggcccccgcagcctacaggccctctcccaccggtctc
cccacccctgccaccacccctcccaccaggcatagcgttcctgtcgccctttccgaggac
gatgtcagtggatggggtgctcaacctcgcgttaggaaaactttcgagcatggtgctcct
cctggatttggcagctggaagaatggccagcacgttgttggtgctaggaacacgaggatg
gaaaaggagatgtatggtgaagtgggagacggattgcaccagtccaccggtatcaacttt
gacaagtacgccgatatccccgtcgaggtcagcggcaagggcgttcccgagcctgtgact
gaatttaccaacccccctatcaaccccgtccttctcgagaacgtcaagtacgctcgatac
accacccctacccctgtccaaaagtactccattcctatcgttgccgatggccgtgatctc
atggcctgtgcccagaccggttccggtaagactggtggtttccttttccccatcctttca
gctcttttcacctacggtccttccgctcctcccgttgagcaggacactggctacggctac
aggaggacaaagaaggtttaccccacggcccttgttcttgcccctacccgagaacttgtg
tctcagattcacgaagaggctcgtaaattcgcctaccgatcttgggtccgacctgccgtc
gtttacggtggtgccgacattggctcccaaatgcgcgccctcgaccgaggatgtgacctt
ctttccgccacccctggtcgtcttgtcgacttgattgagcgaggcaagatcagtcttgcc
aacgtcaagtacctcgttcttgacgaagccgaccgaatgcttgacatgggtttcgagcct
cagattagaagaatcgttgatgaggaagacatgcctggcgtcctcgaccgtcagactctc
atgttctccgccaccttccctcgagagattcagaaccttgctcgaagtttcctcaaggag
tacatcttcttgactgtcggccgagtgggttctacttccgaaaacattacccagcgtgtc
gagtatgtcgacgaccaggacaagcgctcgttgcttctcgatttgctccttgccgaacag
tctggcggtttgatcctcgtctttgtcgagaccaagcgtatggccgacactctttgtgac
ttcctctgctctcgtcgacacaatgccacttctatccacggtgaccgtacccagcgtgag
cgtgaagccgctctctacgcattcaagtccggtcgtgcccccattctcgttgctaccgcc
gtcgccgctcgaggtctcgatatccccaacgtcactcacgtcatcctctacgatctcccc
aacgacgttgccgagtacactcaccgtatcggtcgaactggtcgtgcaggaaacgtcggt
acttctactgccttcttcaaccgaggaaacagcaacattggtaaagatttgattgagctc
ctcaaagaggcgaatcaagaagttcctcaatggcttgttgagatctcctccgaaaggagt
ttcggtggtggcggtggtggcggtggtgggtacagaggaggtcgaggacgaagcactggt
ggtggtggcggtgggaggatgggcggacgagatatgcgtcaaggtggtggtggtggtggc
ggcggttatgggggcggtgggtacggcggtggtgcaaggactggtgggggttacggaggt
ggtggtggtgcctcatggggtaatggcggtggtttcccacctgccggcggcgactctggc
gcgagctggtggtaa
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