Cryptococcus gattii: CGB_B1580W
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Entry
CGB_B1580W CDS
T02232
Name
(RefSeq) splicing factor Prp8
KO
K12856
pre-mRNA-processing factor 8
Organism
cgi
Cryptococcus gattii
Pathway
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_B1580W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgi03041
]
CGB_B1580W
Spliceosome [BR:
cgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CGB_B1580W
Complex C
U5 SnRNP specific factors
CGB_B1580W
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
PRO8NT
U6-snRNA_bdg
U5_2-snRNA_bdg
RRM_4
PROCT
Hom_end_hint
JAB
GIIM
Motif
Other DBs
NCBI-GeneID:
10187013
NCBI-ProteinID:
XP_003191948
UniProt:
E6R027
LinkDB
All DBs
Position
B:join(364449..364661,364727..364882,364938..366718,366772..367415,367466..367560,367609..367829,367884..369036,369085..369236,369289..369990,370053..370267,370318..370367,370418..371338,371386..371560,371611..372656,372718..372786)
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AA seq
2530 aa
AA seq
DB search
MSTVPPGFGAPPPGFIPQPNGNGDGMEGDFFGQLRQEEIDKKARKWRQSQKRRFNPKRRQ
GGGGGVDFGKADLPPEHIRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPM
PWEQVREVPVLYHISGAITFVNEVPRVIEPVYHAQWASMWLAMRREKRDRRHFKRMRFPP
FDDEEPPMDYGDNVLDVEPLEAIQLELDEEDDEAILEWFYDPKPLVDTPQVNGSSYKYFQ
LTLPQIANLYRIGRQLLSDYSDNNAFYLFDKKSFFTAKALNIALPGGPKFEPLYRDMDAF
DEDWNEFNDINKIIIRNVIRSEYKVAFPHLYNSLPRSVHIGIYHEPKNVYIKTDDPDLPA
FYFDPLINPISQRVVQEAHTPLVSHEDQVFGFGNDEDDEFELPDEIEPFLGERDLENDNT
ADAIALYWAPYPYNLRSGKMKRAQDVPLIKNLYLEHCPDGQPVKVRVSYQKLLKVYVLNA
LHNKPPKAMVKRNLFRSLKNTKFFQSTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHL
DYNLNLKPIKTLTTKERKKSRFGNAFHLCREILRLTKLIVDAHVQFRLGNVDAFQLADGL
QYMFAHVGQLTGMYRYKYKLMKQIRMCKDLKHVIYSRFNTGPVGKGPGVGFWAPGWRVWL
FFMRGIVPLLERWLGNLLARQFEGRNSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMP
EGVKQNKAKTILQHLSEAWRCWKANIPWKVPGMPAAIENIILRYVKSKADWWTSVAHYNR
ERIRRGATVDKAVVRKNLGRLTRLYLKAEQERQNGYLKDGPYITSEEGTAILISTAHWFE
SRKFAPIPFPPLSYKHDTKLLVLALEKLKEAYSVHGRLNQSQREELALVEQAYDNPHECL
SRIKRLLLTQRAFKEAGIEFFDTYDKLIPCYDVEPLEKLSDAYLDQFLWYEADKRRLFPS
WVKPSDSEPPPLLVYKWCQGINNLTDIWDTSEGESVVMMETVLARVYEKVDLTLLSRLLR
LIMDHNLADYITSKNNTTLTFKDMSHINTYGMIRGLQFSSFVFQYYGLVLDLLVLGLERA
SEIAGLPEAPNGFLQFKNREIETKHPIRFYSRYVDRIHILFRFTAEESRDLIQRYLSVQP
DPNNENVIGYNNKRCWPRDCRMRLIKHDVNLGRAVFWNVKNSLPRSLTTIEWEDTFVSVY
SKDNPQLLFSMCGFEVRILPRVRTQNGEAYSLKDGVWNLTQESTKERTAQAFLRVSDQGI
QDFNNRIRQILMSSGSATFAKIINKWNTCLIGLMTYYREAVVHTNELLDSLVKAENKVQT
RVKIGLNSKMPSRFPPCVFYSPKELGGLGMLSMGFVLIPQSDLRWSKQTDSGGITHFRSG
MTHEEDQLIPNLYRYLQPWEAEFLDSARVWSEYALKRKEATASNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRVRQYFSQFFRLRNQPFIWTNQRHDGKLWQLNNYRVDVIS
ALGGVEGILEHSLFKGTAFPTWEGLFWEKACLQNGTRLLRADGSEILVEDVQEGDQLLGP
DGTSRTASKIVRGEERLYRIKADELEDLVCTHNHILSLYKERSGSEQDPSPSTDLSSTDS
YERVDVTVDDFVGLPQQEQQKYRLFRSTGFKRADQPSTSSLATLLHIMSIQLEEKPTKWS
GFVVDKDSLYLRHDYLVLHNSGFEESMKNKRLTNAQRSGLSQIPNRRFTMWWSPTINRAN
VYVGFQVQLDLTGVFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQEMEALQI
ETVQKETIHPRKSYKMNSSASDILLFSSYKWQISRPSLLTDNRDTMDGTTSNKFWLDIQL
RWGDFDSHDIERYARAKYLDYSSDSQSIYPSPTGNLIAIDLAYNLYSAYGCYFPGLKPLL
QQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLNSSNYSELFSNQIIWFVDDTNVY
RVTVHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVA
ALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQATLKMEKFGDLI
LRATQPQMVLFNLYDDWLKSISSYTAFSRLILILRALHVNNEKSKIILRPDKNTITESYH
IWPSLSDDEWMKVEVALKDLILADFGKRNSVNVASLTASEIRDIILGMEIAAPSVQRQQM
AEIEKNTEAAAQVTALQTKTTNIHGDEIVVTTTTQYEQQTFASKSDWRVRAISATNLPLR
VNHIFVGNDDVKDDAGSYTYVIPKNVLRSFIVNADLRTQVVAYLYGTSPPDNKQVKEIKA
VAWIPQRGTNNGVDLPVALPKHDFLLKDLEPLGWIKTQSQELNHLSPQDVTTQAKIMAAH
PEWGPQAICVTCSFTPGSVSLNAWDLTVAGFEWGRKNEDVTGQNPGFNPSMANRVQLLLS
DRILGMTLVPEGGVWNYGVGLTQSWSEKIPYTMTLDKPEAFWAPCHRPNAFLNFASMEGD
DAADVENSLE
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcccgccaggattcggtgcgccgcccccgggattcatccctcagccgaat
ggaaacggagacggcatggagggagacttctttggacaattaagacaggaggagatcgat
aagaaggctaggaaatggaggcagagtcagaagagaagatttaaccctaagagaagacag
ggtggcggtggcggtgtggattttggaaaggcggatctgccgccagagcacatcaggaaa
atcatcaaggatcacggtgatatgtcaaataggaagtttagaaatgacaagcgagtgcat
ttgggtgccttgaagtacgtgccgcatgcggtcatgaagcttttggagaacatcccaatg
ccctgggagcaagtacgtgaagtaccagttctctaccacatttccggtgccatcactttt
gtcaacgaagtcccccgagtcattgaaccggtgtaccacgctcagtgggcttcaatgtgg
cttgcaatgcgtcgagaaaagcgagatcgacgacacttcaagcgaatgcgattccctcca
tttgacgatgaagagccgccgatggattacggagataatgtgttggatgttgagccgcta
gaagccattcagttggagttagatgaggaagacgatgaggcaatcttggagtggttctac
gaccccaaacccctcgttgacacccctcaagtcaatgggtcgagctacaaatatttccaa
ctcacccttcctcaaatagccaacttgtaccgcatcggcagacagctgttgagcgactac
tcggacaacaacgcgttctatttgttcgacaagaagagttttttcaccgccaaagcgctt
aacattgctttgcccggtggtcccaaattcgagccgttgtaccgagacatggacgccttc
gacgaggattggaacgaattcaacgatattaacaagattattatccgaaacgtgatccga
tccgagtacaaggttgccttccctcatctctacaactcgcttcctcgatccgtccacatt
ggtatttatcacgagcccaagaacgtttacatcaagaccgacgatcccgacctccctgca
ttctactttgatcctcttatcaaccccatctctcaacgagtcgtgcaggaggctcacact
cctcttgtctcccatgaagatcaggtgttcggatttggtaacgatgaagatgacgagttc
gagttgcccgacgagatagagccatttttgggagagagggatttggagaatgataacacg
gcagatgctatcgctttgtactgggcaccatacccttacaatttgcggagtggcaaaatg
aagcgagctcaggatgtgcctttgatcaagaacctttatcttgaacattgtcctgacggt
caacccgtcaaggttagagtttcttaccagaagcttcttaaagtgtacgtgttgaacgct
cttcacaacaagccacccaaggcgatggtcaaacgaaaccttttccgaagtttgaagaac
actaagttcttccagtccaccactcttgactgggtggaggccggtcttcaggtctgtcgg
cagggttataacatgctcaaccttcttattcaccgaaagaacctcaactacctccatttg
gattacaatcttaatctgaagcccattaagactcttaccaccaaagagcgaaagaagtct
cgatttggtaacgctttccacctttgtcgagaaatccttcgtctcaccaagctcattgtt
gacgcccacgttcaattccgtctcggtaatgtcgacgctttccagcttgctgacggtctt
caatacatgttcgctcacgtcggtcaattgaccggtatgtaccgatataaatacaagctt
atgaagcaaatccgtatgtgcaaggatctcaagcacgtcatctactcgagatttaacact
ggccctgttggtaagggtcctggtgtcggtttctgggcgcctggatggagagtttggttg
ttctttatgaggggtattgtccctttgcttgaaagatggttgggcaacttgttggctaga
cagttcgagggtaggaacagtaagggtgtagccaagactgttaccaagcaaagggtggag
tctcacttcgacttggaacttcgtgccgcggtcatgcacgatatcttagatatgatgcct
gaaggtgtcaagcagaacaaggccaagaccatccttcagcatctttcggaagcttggcga
tgctggaaggccaatattccttggaaggtccctggtatgcccgctgccattgaaaacatc
attctccgatacgtcaagtccaaggccgattggtggacgtctgttgcccattacaacaga
gaacgtatcaggcgaggcgctactgtcgacaaggctgtcgttcgtaagaacctcggccga
ttgactagattgtacctcaaggctgagcaggagaggcagaacggttacctaaaggacggt
ccttacattacttccgaagagggtaccgctattcttatctctactgcccattggtttgaa
tctcgaaagtttgctcctatccccttccctcctctttcttacaaacacgacaccaagctt
ctcgttctcgcgcttgaaaagctcaaggaggcgtacagcgtccacggtcgacttaaccag
tctcaacgagaagaattggcactggttgagcaggcatacgataacccgcacgagtgtttg
tcgcgtatcaagaggttattactgactcaacgagcgttcaaggaagctggtattgagttc
tttgacacttatgacaagttgatcccttgttacgacgttgagcccctcgaaaagctcagt
gacgcgtatcttgaccagttcctatggtacgaggccgataagagaagacttttccctagc
tgggtcaaaccatctgattctgagcctcctccccttctcgtctacaaatggtgtcagggt
atcaacaacttgaccgatatctgggacacttctgaaggcgaatcggttgtgatgatggaa
acagtgttagcaagagtgtatgagaaagtcgacttgactcttctgagtcgattgttgcgt
cttatcatggatcacaatttggctgattacatcacttcaaagaacaacactactcttacc
ttcaaggatatgtctcacatcaacacctacggtatgattcgaggtcttcagttctcctca
ttcgtattccagtactacggtcttgtccttgatcttctcgtccttggtcttgagcgagcc
agtgaaatcgccggtctccccgaagcacccaacggtttccttcagttcaagaaccgagag
atcgagaccaagcatcccatccgtttctactcgcgatacgtcgaccgtatccatattctg
ttccgcttcactgccgaggagtctcgagatcttatccagcgatatctcagtgttcagcct
gatcctaacaacgaaaacgttatcggttataacaacaagcgttgctggccccgagattgt
cgaatgaggcttatcaagcatgatgtaaaccttggtcgtgcagtcttctggaacgtcaag
aactctttgcctagatctctcactaccatcgaatgggaagacacatttgtctctgtctac
tctaaggacaaccctcagctcttgttctccatgtgcggattcgaagtccgaatccttccc
cgagtccgtactcagaacggcgaggcttactctttgaaggacggtgtttggaaccttact
caagagtctaccaaagagcgaacagcccaggcgttcttgcgtgtctccgaccagggtatc
caagacttcaacaaccgtatccgacagattctcatgagctcgggtagtgcgactttcgcg
aagatcatcaacaagtggaacacctgtcttatcggtttgatgacttactaccgagaggcc
gtcgtgcacaccaacgagttgcttgattctctcgtcaaggccgaaaacaaggtccagact
cgtgtcaaaattggtcttaactccaagatgccttctcgtttccctccctgtgtcttctac
tcgcctaaggaacttggtggtctcggtatgctttccatgggtttcgtacttattcctcag
tccgatttgaggtggtccaagcagactgacagtggtggtattactcatttccgctctggt
atgacccacgaggaggaccagttgatccccaacttgtaccgatacttgcaaccttgggaa
gcggagttcttggattctgcgagagtgtggtctgagtacgctttaaagaggaaggaggct
accgcttctaatcgtcgactcactcttgaagatcttgaagacagttgggatcgaggtatt
cctaggatcaacacccttttccagaaggacaggcacacacttgcttatgacaaaggatgg
cgagttcgtcaatacttcagtcaatttttccgacttcgtaaccaaccgttcatttggact
aatcaacgacatgatggtaaactttggcaacttaacaactatcgagttgatgttatctct
gctctcggtggtgttgagggtatcttggaacactccttgttcaagggaactgcgttccca
acctgggagggtctgttctgggagaaagcctgtctgcagaacggtacccgtcttcttcgt
gctgatggctccgagattcttgtggaagatgttcaagagggcgatcagcttcttggtccc
gatggaacgagcagaacagcgagcaagatcgttcgcggtgaggagcgtctctatcgtatc
aaagccgatgaactcgaagatctggtctgtacacacaatcacatcctttcattgtataag
gaaaggtctggctcagagcaagatccttctcctagtaccgacctcagctcgacggatagc
tatgagagagttgatgtgactgtcgatgactttgtcggccttcctcaacaagagcaacag
aaatatcggcttttccgttcaactggttttaagcgagccgatcagccttccacttcttca
ttagccaccttgttacacatcatgtctatccagctggaggaaaagcctacaaagtggtcc
ggttttgtggtggacaaagacagcctttatctccgtcatgactatttggtattacacaac
tcaggatttgaggagtctatgaaaaacaagcgattgactaacgcccaacgttccggtctt
tctcagattcccaatcgtcgattcactatgtggtggtctcccaccatcaaccgagccaat
gtctacgttggtttccaagtccagctcgatttgactggtgttttcatgcacggtaagatc
cccactttgaagatctctttgattcaaatcttccgagcgcacttgtggcagaagatccat
gagtctgttgttatggatttgtgtcaagtctttgatcaagagatggaagcactccaaatc
gaaactgttcagaaagagactatccaccctcgaaagtcgtacaaaatgaactcttcggct
tctgacattctccttttctcgtcttacaagtggcagatttctcgaccgtcccttcttact
gataaccgggacactatggacggcactacctccaacaagttctggctcgacatccagctc
cgatggggtgacttcgactctcatgatattgagcgttacgcccgtgcgaagtacctcgac
tattcgtcggacagtcagtccatctacccatcgcccaccggtaatcttatcgcgattgac
ttggcatacaacctctactcggcgtacggttgttacttccccggtctcaagccgctcctc
cagcaagcgatggcgaaaatcatgaaggccaaccccgctttgtatgttttacgtgagcgt
atcaggaagggtctccagctctattcatccgagcctactgagccttaccttaactcttcc
aattactccgagttgttctcaaaccagattatctggttcgtagacgacaccaatgtctat
cgagtcacagttcataagaccttcgaaggtaatctgactaccaagcccatcaacggtgct
atcttcatcttcaatcctcgtacaggtcaactcttcttgaagatcattcacacctcggtt
tgggcaggtcaaaagcgtctaggccagttggccaaatggaagacggccgaagaagtagct
gctttggttcgatcattacccgtggaagaacagcccaaacaagtcattgtcacccgaaag
ggtatgcttgaccccttggaagtccatttgcttgatttccccaacattgttatcaagggt
tctgaactccagttgccattccaagccactctcaagatggagaagtttggtgacttaatt
ctgcgtgcaactcaacctcaaatggttttgttcaatctttatgacgattggctcaagtct
atctcaagttacactgccttttctcgtcttattcttatccttcgtgctttgcacgttaac
aacgaaaagtctaagattatcttgagacctgataagaacactatcacagagtcttaccac
atttggccatcgcttagtgacgacgagtggatgaaggtggaagtggcgctcaaggatctc
attttggctgactttggtaagaggaacagcgtcaacgtagcctccctcaccgccagcgaa
atccgagacatcattttgggtatggagattgcagcgccctccgttcaacgacaacagatg
gctgagatcgaaaagaacactgaggctgccgctcaggttactgctctccagaccaaaacc
accaacatccacggtgacgagattgtcgtcacgacaactactcaatacgaacagcaaacc
tttgctagtaagtctgactggcgtgtacgagctatcagtgccaccaacttgccgcttcgt
gtcaaccacatctttgttggcaatgatgatgtgaaggatgatgctggcagctacacatac
gttatccccaaaaacgtcttgcgaagcttcattgtcaacgccgatctccgtacacaagtt
gttgcctacctttatggtacctcaccccccgacaacaagcaggttaaggagatcaaggcc
gtcgcttggatccctcagaggggtaccaacaacggtgtagatcttcccgttgccctgcct
aaacacgacttccttctcaaggatcttgagccccttggttggatcaagacgcagtcacaa
gaactcaaccacctttctcctcaagacgtcaccacccaagcgaagattatggctgctcat
cccgagtggggacctcaggccatttgcgtcacctgttctttcactcctggttccgtctct
ctcaacgcttgggacctcacagtggccggcttcgaatggggtaggaagaacgaggatgtc
acggggcagaatcctggattcaacccgtccatggccaaccgagttcagttgctgttatct
gacaggattttgggtatgactttagttcctgagggtggagtttggaactacggggttggt
ttaactcagagctggtcagagaagatcccttacacaatgactctcgacaagcctgaggcg
ttctgggccccttgtcaccgacctaatgctttcctcaactttgcctcaatggaaggcgat
gatgcggccgacgttgagaacagtttggagtag
DBGET
integrated database retrieval system
