Cryptococcus gattii: CGB_B2130W
Help
Entry
CGB_B2130W CDS
T02232
Name
(RefSeq) cleavage/polyadenylation specificity factor
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cgi
Cryptococcus gattii
Pathway
cgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CGB_B2130W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgi03021
]
CGB_B2130W
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_B2130W
Transcription machinery [BR:
cgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CGB_B2130W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CGB_B2130W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
zf_UBZ
DUF7340
zf-Tbcl_FmdE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
10187204
NCBI-ProteinID:
XP_003192002
UniProt:
E6R063
LinkDB
All DBs
Position
B:join(471393..471626,471690..472657,472705..472879,472942..473178,473228..473449)
Genome browser
AA seq
611 aa
AA seq
DB search
MAYQAYPAYQQALYYPPPPVQPTTDVFRRQYADRLRALTFNSRPIIQDLSMLAMAARDRN
DWDGMQAVVEEIELAVLRALPQQKLPLLYLLDSISKNVGAPYTTRLLQPVVPRLYIKTYR
EVDGVTKTKMEEMIGLWRTGGPGGSELYGSHVREQVERELFGSAGIQNFKAPNRQQVQVL
LNAALDNKRREVAMRPGDVVLGRQLNALLGIGELLSTTNVQPQELSMIVEQLKSMAPPSV
APTPTQISVTSSWGPSPSVNDLAPSNLPPFPPKLPAVNGNGYANAALPPFPSNVPTPLGT
ISTPPMTSSQTPVHGSQRSSTPVMASASLAPVPSIIPSMPSLPVDVARILQTLNKSGIGS
QPQTPDVERGTPGPSTVPTTEAYEDMIVRLDIKLQSIDLNAPHKLSFAHLSHRCQQCGMR
FPSANTAFDAHMDWHFRRNKKEREPGGRGAHRRWLPRVEQWINDAITLPTTAASTSQTEK
ATISAERLAQLRQKWVKVPQDSKKAASVCPVCKEAFKAEWSDSEEEWIWKNALAINGVFY
HATCRAEQTSALKRLKAAEPNRRTSSSASPRTTPSNEGLKPEAQKRKVEGMDVEHEESAK
RVKVEEIVDDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcaagcctatcctgcctatcaacaggccctatattaccctccacctcccgtt
cagcctacaactgatgtatttcggaggcagtatgcagatagattgagggcgctcacgttc
aactcgaggcctattattcaagatttatcgatgttagcaatggcggcacgagatcgcaat
gattgggacggaatgcaggctgttgtggaggaaatagagttggctgtcttgagagcactt
ccccaacagaagcttcctttgctttatttgcttgattccatttccaagaatgttggagcc
ccttatacaacccgtctgcttcaaccagtcgtgcctaggctatatataaagacgtatcgt
gaggtcgacggcgtgaccaagacaaaaatggaagaaatgattggtctctggcgcactgga
gggcctggcggttccgagctgtacggttctcatgtcagggaacaggtggaaagggaatta
tttggttcagcgggcattcaaaacttcaaagctcccaatcgacaacaagtccaggtgctt
cttaatgcagcgttggacaataaacgacgtgaagtggcgatgagacctggtgatgtggtt
cttggtcggcagttgaatgcattgttgggtattggggagctgcttagcacgacgaacgta
cagcctcaggagctgagtatgatagtagagcagttaaagtcgatggcgcctccatcggtg
gctcctactccgactcaaatatctgtcacatcttcttggggaccctctccctctgtgaat
gacttggccccctcaaatctcccgccctttcctccaaaacttcctgctgtcaatggcaat
ggatatgctaatgctgccttaccaccgttcccttcgaatgtaccaacaccactcggaact
atctccacacctccgatgacaagctcccaaactcccgttcatggcagccaacgctcgtca
actccggtcatggcatctgcttctcttgctcctgtaccctctattataccatccatgcca
agtcttcctgttgatgtcgccagaattcttcaaactttgaacaagtcggggatcggtagt
caaccgcagaccccggatgttgaaagagggacaccaggaccaagtacggtccctacaacc
gaggcttacgaggatatgattgtgcgattggatataaagctacagtcaattgatctaaat
gctccccataaattgtcttttgctcacctttctcaccgttgccagcaatgtggtatgaga
tttccttcggccaatactgcgtttgatgcccacatggattggcatttcaggagaaacaag
aaagagcgcgagccggggggcagaggcgcccatcgaaggtggcttccgcgggttgagcaa
tggatcaatgatgctatcactcttccaactaccgcggcatcaacaagtcaaactgaaaag
gctacgatctcagcggaacggttggcgcaactgcgacaaaaatgggtgaaggtgcctcaa
gactctaaaaaggccgcgtcggtgtgcccagtgtgcaaagaagctttcaaagcagaatgg
tctgatagtgaagaggaatggatatggaaaaacgcattagccatcaatggcgtcttttat
catgcaacttgtcgagcggagcaaacatctgctttgaaacgtctcaaagctgccgaacct
aatagacgcacatcttctagtgccagtcctaggacgacaccttccaatgaaggactgaag
ccggaggcgcaaaagagaaaggttgaaggcatggatgtagaacatgaagagagcgccaaa
agagttaaggtagaggagattgtggatgacatataa
DBGET
integrated database retrieval system
