KEGG   Cryptococcus gattii: CGB_B5180W
Entry
CGB_B5180W        CDS       T02232                                 
Name
(RefSeq) DNA-directed RNA polymerase II 13.3 kDa polypeptide
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
cgi  Cryptococcus gattii
Pathway
cgi03020  RNA polymerase
cgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CGB_B5180W
  09124 Replication and repair
   03420 Nucleotide excision repair
    CGB_B5180W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgi03021]
    CGB_B5180W
   03400 DNA repair and recombination proteins [BR:cgi03400]
    CGB_B5180W
Transcription machinery [BR:cgi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CGB_B5180W
DNA repair and recombination proteins [BR:cgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CGB_B5180W
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L BBS7_hp
Other DBs
NCBI-GeneID: 10187676
NCBI-ProteinID: XP_003192244
UniProt: E6R0W5
LinkDB
Position
B:join(1146623..1146675,1146750..1146839,1146895..1147240)
AA seq 162 aa
MNQPNRVDSWLLQDDEKPLTITEDPKLPNASTIVIRRQDHTLGNMLRAQLMLDPTVLFAG
YKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQFQQQAKNIEMGMGPEQ
GVAPGVAGANGAYDPYGDGFGREGNVVVGGATREQGQDVYDF
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaatcagcctaatagggtcgactcgtggttattacaagatgatgagaagccattgacg
atcacggaggaccccaaactgcccaacgcttccactatagtcatacggcgacaggatcat
acattgggaaacatgcttagagcacaattaatgctcgaccccactgtcctcttcgcaggc
tacaaagttccacatcccctcgaaaacgacattcttctcaaaatccaaactgatgagcgg
tcgaaccctgccgaagctctcaaacgtgcatgtcatgaactgatccggcaaactgtacac
atcaaagctcaattccaacagcaagcaaagaacatcgagatgggtatgggtcccgaacaa
ggagtcgctcctggtgtagctggcgcgaatggagcgtatgatccgtatggggatggattc
gggagagagggcaatgtggtcgtcggcggtgcaacgagggagcaggggcaggatgtatat
gacttctag

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