Cryptococcus gattii: CGB_B6240C
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Entry
CGB_B6240C CDS
T02232
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
cgi
Cryptococcus gattii
Pathway
cgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGB_B6240C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_B6240C
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CGB_B6240C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
10187695
NCBI-ProteinID:
XP_003192378
UniProt:
E6R155
LinkDB
All DBs
Position
B:complement(join(1373900..1374165,1374216..1375205,1375406..1375441,1375641..1375834,1375883..1376954,1377010..1377335,1377390..1377739))
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AA seq
1077 aa
AA seq
DB search
MAENSQIKPRPERHRHKNRKAIEGDVSSSRSKGKERAIDVNGDVTRVDVAKAGKKRRKRQ
APSGLPSLPVDSSIEQQGECSTSRGPRRRENGEHWDSIPIAQNEVTRVPPVWSKDGRFYF
SVVHTSIHVHSSTSSNFSRLSTLSSTHPKGHSKSITSLHLSPINPFQIVTSSLDGTVKIW
DWVAGRLIRTVDFHEPQSKVDHVAFGQVVGKWWLFAAVTHIKQSSSGQKLAHRLLRTPLG
GNSNPILLGKLSNRPVSLIMSPRSTYLVALAANKAYTYRMPAPPFKSSDPWEDRPTCVKF
VSDQPFTCGAFCPEKTLASATEEEWFATGDQKGVIRLWHGLTQAFRQVDAAASLALGGVV
DSTQNPETEKRLPTTSLHWHAHAVSAIAFTPSGSQLLSVGEESVLVQWHLASGRREYIPR
LGGRPIVSLTVRKATAAGEEEWWMALSDGSVVRVGASSNRVASVGQGIRLDPLRPSSPDT
PYPLSVHPSTGSLVVPSSHPSTIQFIDPIASTVLFDLEVVPSNRVSRREEKELEPVKVEK
IAFSEEHNGKSVWMATLEGREGDEGEGGGMVKNLKMWKWMDDRYLVNTQFPRPHGTSKIS
SVSFSPVPSEPGTSSKSVSTPNPYLLTTSNDGVAKIWQVRQSKRSEQGKVTAKKPTIMEL
YWSCRSTFNYRNLPIRASAFSSDVSILALSHGSVVTVWDVNSNILLKVLDSGLATDVMSI
GFVGKEGRWLIGGGEGKGVAVWDLLSCEVAWSSPSLVVDSLITSSTSAYFLTASNVFSGT
TLRVFTPDSSAPLRTISIDTKVTHIVSLSQSSASDSSSSLHLIGITSTGEIYRFGDIAAA
VAPESAKSVRQAQAKEGLSIWQEMFGKGAFLEEPEAEEPITATTSALQQRVSDKSGRPAD
IFEGPSHTMPPTSMLFDAFMDELLHGNTAMKEGENVKEVTKDEAMVYEMEVDESGDKAED
SAAGEIKGRVVEDEEIRELEAFFKGLLSSVPRAPATPASRKPETLRNGLPSHLMNHTPAR
SVSTPLLNRKANGDAPRGRASLLAVGNQVDESDIGTPGSLTASGNKKGKKRKAPREE
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaactcgcaaataaagcctcgtccggaaaggcataggcataaaaacaggaaa
gccatcgagggcgatgtctcttcctcccgttcaaagggtaaggagcgtgccatcgacgtc
aacggggacgtgacccgtgttgacgtagcaaaggctggtaagaagaggagaaagaggcag
gcacccagcggattgccgtctttgcctgtagatagctcgatagagcaacaaggggaatgc
tcgacttctcgagggcctcggcgaagagagaatggtgagcactgggactctataccgatc
gcccaaaatgaggtcactcgtgtcccaccggtctggtctaaagacggcagattctacttt
tctgtggttcacacctccatccatgtccactcttccacatcatcaaacttttcgcgcctc
tcaactctctcttcaacccacccgaagggtcactctaaatctataacctcccttcatttg
tctcccataaaccccttccagattgtaacctcttcattggatggtactgtcaaaatctgg
gattgggtggctggcaggttaatcagaactgttgatttccatgaaccacaatccaaagta
gaccatgtggcctttggtcaggttgttggaaaatggtggctttttgctgctgtaacccat
atcaaacaatcatcttcaggacagaagttggctcatagactcttgagaactccgcttggc
ggcaattccaatcccattcttcttgggaaattgtctaaccgtcctgtatctctcattatg
tctcctcgatccacctatctcgttgctcttgctgcgaacaaggcctatacctatcgtatg
ccagctccccctttcaaatcctctgatccatgggaagatcgcccgacttgtgtcaagttt
gtgtctgaccagccttttacttgtggtgcattctgcccagagaaaactctggcgtccgcg
acggaggaagaatggttcgctacgggtgatcaaaagggtgtcatcaggctctggcatggt
ctaactcaggctttccgacaagtcgacgcggctgcttcactggctttggggggtgttgtt
gactctactcaaaaccctgaaaccgaaaagcgattgcctaccacgtcactccattggcac
gcgcatgctgtatctgccatcgcatttacaccttctggatcacagcttctttccgtcggt
gaagaatctgtgctcgttcagtggcatcttgcctcgggcagaagggagtatatccctcgg
ctgggtggacgtccaattgtcagccttactgttagaaaggctaccgcagctggggaagag
gagtggtggatggccctctccgatggttctgttgtgcgcgtaggagcctcttcgaaccga
gttgccagcgttggtcagggtattcgcctggaccctttacggccgtcttcccctgatact
ccctatcctctctccgttcacccttccaccggttctcttgttgttccctcctctcatcct
tctaccattcagttcattgaccctatcgcgtccactgtgcttttcgacctcgaggttgtg
ccctctaatagggtgagcagaagagaggaaaaggagcttgagcctgttaaggtcgagaag
attgctttttcagaggaacataatggcaagtcggtgtggatggctacgttggaaggtcga
gaaggtgatgaaggtgaaggtggcggtatggtcaaaaacttgaagatgtggaagtggatg
gatgacagataccttgtaaacactcagttccctcgtcctcatggtacatcaaaaattagc
tccgtcagtttttcgcctgtgccttctgagcccggtacctcctcaaaatccgtttctaca
cccaatccatatcttctgactacctcaaatgatggtgttgccaagatctggcaggtccga
cagtcgaagaggagcgaacagggcaaagttactgccaagaagcctaccatcatggaactt
tactggtcatgtcgctcgacctttaattaccgcaaccttcctatccgagcatccgccttt
tcatctgatgtttccattcttgccctttctcacggttctgtagtcactgtctgggatgtt
aacagcaacattttgctcaaggtccttgacagtgggcttgccacggatgtaatgagcatc
ggattcgttggcaaagaaggcagatggctgattggaggtggagaagggaaaggtgtagca
gtatgggaccttctctcttgtgaggttgcttggtcgtcccctagcctcgtcgtcgatagc
ctcatcacttcttctacctccgcgtatttcctcaccgcctccaacgtattttcaggtact
acgcttcgagtattcacccccgattcctctgcccccctccgaactatctctatcgacacc
aaagtcactcatatagtctccttgtcccagtcatctgcgtcggactcatcttcctcttta
cacctcatcggtattacatcgacgggcgagatctaccgctttggtgatatcgcggcagct
gttgcgccagagtcagcgaagagtgtccgccaagcgcaagccaaggagggcctttccatt
tggcaggagatgtttggcaagggtgctttcctcgaggagcccgaagctgaggagcccatt
actgcaactacttctgctctacagcaacgtgtctctgacaagtccggtcggcctgccgac
atttttgaaggtcctagtcatacaatgccccccactagcatgttgtttgacgcgttcatg
gatgagttactgcatggtaacacagctatgaaagagggcgaaaacgtgaaggaagtcaca
aaggatgaggccatggtttatgaaatggaggttgacgagtctggtgacaaagccgaagat
tcggctgccggcgaaatcaaaggcagggttgttgaagatgaagaaattagggaactcgaa
gctttcttcaagggcttgttatcttctgtcccccgagcacccgctacacctgctagtcga
aagcctgagacacttcgcaatggtttgccttctcatctcatgaaccatactcctgcccgt
tcagtgtcgaccccactcctcaaccgaaaggcgaacggtgacgcacctcgtggtcgggca
tctttgttagctgtcgggaatcaggtagacgagtcggacattggtaccccaggaagtctc
accgcatctgggaacaagaagggtaaaaagagaaaggccccgagggaagagtag
DBGET
integrated database retrieval system
