Cryptococcus gattii: CGB_C0660C
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Entry
CGB_C0660C CDS
T02232
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cgi
Cryptococcus gattii
Pathway
cgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CGB_C0660C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgi03021
]
CGB_C0660C
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C0660C
Transcription machinery [BR:
cgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CGB_C0660C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CGB_C0660C
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
zf-CCCH_3
zf-CCCH_9
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
10186930
NCBI-ProteinID:
XP_003192540
UniProt:
E6R2P5
LinkDB
All DBs
Position
C:complement(join(177631..179075,179126..179185,179244..179333,179386..179815))
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AA seq
674 aa
AA seq
DB search
MSVPLPSPSPLSSAQDGPISSTGDNSDMSASAKPIPRSRPAPVATAGSPEKTSGTPASYK
YRPGAATSIGKSFNNDNWRDRSPAPTSAMPATFSGKGPERTVGFEKRDVSSLKSNGGSAL
SREREKEENKEKESEKDKEGKEKSALGHVPCRFFKAGACTAGESCPFSHAAPDSAKREVC
QWFLKGNCKFGHKCALAHVRPGEPMSMDRKNKKAAQLEARERSGEVTTSGTRKATPTAIP
SALEESGASPVPIRSALSSSIQSNPTRIGSSPMREPFGPPSGALPNSPPNGFAHSYTRGH
PAFASSPNRPSPLSASFGAVGSGLAAGSVPGPFSLKQGSNLLSSLRPPVSATPTFSSSFS
HSSLAIERPSNAVATPLSASFAGEAPALHRSIWARSDQPAEPLSPRRPIPRTIKPEAVFE
DDDDHGEEFLPSSLSDLLTPQERARRMSHRDSQDSSYSPSLAGYAAQAPIWGGERLAQSA
GPTMGQKGFLQSLWSADGEDVRKFQPTQPSSAQPQKQDFAFGPTTAQASGPRTSLLTQQR
SPDSASPTSPVRLSSFNPSAVGPGEPFLIRNLGDPGSPSARALIEHAPGQSLPGGLANAL
SRLHLHGPRSTSSLAAVNSGSGRGIGGLGAEWRLAEHEAEGSEDGDGGLTPPNGLGALHS
KREEHDEGLFAMDG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttccgctcccttccccttctcctctctcatctgctcaggatggccctataagt
agcacaggcgacaattccgacatgtctgcttctgcaaagcctatcccccgctcaaggccc
gctcctgttgccaccgccggctcgcctgaaaagaccagcggtactcctgcttcatacaag
tatcgacctggcgcagcgacttctattggcaagtccttcaacaacgacaactggcgcgat
cgatcgcccgcacctacttctgccatgcccgctactttcagtgggaagggccctgagagg
acagtgggatttgaaaagagggatgttagctctttgaagagcaacggaggtagcgcgctg
agtagagagagagaaaaagaggagaacaaggaaaaggaaagtgagaaggacaaggagggc
aaggagaaatctgccttgggccatgttccatgtcgatttttcaaggccggcgcttgtact
gctggagaaagttgtccattctctcacgctgctccggattccgcaaagcgagaggtatgc
cagtggttcctgaagggcaactgcaaatttggacacaagtgtgctcttgcccacgttcga
cctggcgagccgatgtcaatggatcgaaaaaacaagaaagcagcgcagctcgaggcgcga
gaacgaagtggtgaggtaactaccagcgggaccaggaaagccactcccactgctatcccc
agcgctcttgaagagtctggcgccagccctgtccctatacgatccgctctttcctcctca
atccaatcgaatcctactcgtattggatcttctcccatgcgagagccttttggtcctccc
tctggggctttgccgaacagtcctcccaatggctttgcgcactcttacactcgaggtcac
ccagcatttgcttcttcgcccaaccggccttctcctctttctgcaagttttggtgctgta
ggcagtggactagctgcggggagcgttcctgggcctttctcccttaagcagggttcaaac
cttctttcctctcttcgaccaccggtctctgctacccccacattctcctcttcattctct
cattcatcactggctattgagcgtccttccaacgctgttgctacacctctttccgcgtct
tttgctggagaagctcctgcgttgcaccgctccatttgggctcgttccgaccaacctgct
gaacctctgtctcctcgtcgaccgatcccgcgaacaatcaagcccgaagccgtgtttgaa
gatgatgatgaccacggagaagagttccttccttcttctctgtcagacctactcaccccg
caagaacgggcccgccgtatgtctcaccgagacagtcaagactcttcatactctccttcc
ctcgctggatacgctgctcaagctcccatatggggaggcgaacgtcttgcacagagtgcg
ggccctaccatgggacaaaagggattcttgcagtctctctggtctgcagatggtgaagat
gtccgcaaattccaacctacccaaccctccagtgcccagccgcaaaagcaagactttgcc
tttggtcccactaccgcccaagcttccggtcctcgcacttcgttgctcacccaacaacga
tctcccgactccgcctccccaactagtcctgtccgattatcttccttcaacccctccgcg
gttggtcctggcgagccattcttgatccgtaacctcggcgatccgggatccccttccgcc
cgcgcactgatcgaacatgctcccggccaatccttacctggcggtctggctaatgccttg
tcgagactacacctccacggaccccggtcgacgagctcgttggcggcggtcaattccggg
agcgggagagggattggggggctcggtgcagagtggaggttggctgagcatgaggcggaa
ggaagtgaagatggtgatggagggctaaccccgccaaatggcctgggggcattgcattcc
aagagggaagaacatgatgaggggctgtttgcgatggacggataa
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integrated database retrieval system
