Cryptococcus gattii: CGB_C1310C
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Entry
CGB_C1310C CDS
T02232
Name
(RefSeq) histone deacetylase clr3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgi01009
]
CGB_C1310C
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C1310C
04131 Membrane trafficking [BR:
cgi04131
]
CGB_C1310C
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_C1310C
Enzymes [BR:
cgi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CGB_C1310C
Protein phosphatases and associated proteins [BR:
cgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CGB_C1310C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CGB_C1310C
Membrane trafficking [BR:
cgi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CGB_C1310C
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CGB_C1310C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
10186983
NCBI-ProteinID:
XP_003192629
UniProt:
E6R2T1
LinkDB
All DBs
Position
C:complement(join(281603..281814,281895..281982,282073..282333,282413..282508,282585..282651,282721..282777,282882..283038,283131..283320,283397..283524,283593..283705,283761..283913,283969..284257,284324..284717))
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AA seq
734 aa
AA seq
DB search
MANTNAMDIDTPPIASTSAQQLNSVQTPIRTTPVTTMSMPGAAARIARTGYIYDPLMMLH
CMEGYMPTAENVMDNGDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDFEEVTFEQVLLVHG
EEMWDKVQATELLTDQQIQDTKEYYDQLSLYVCRETAHCARLSAGGVIQTCRSVCKNEVR
NAFAIVRPPGHHAEPNEHMGFCFFNNVAVATREMQREGLAKKVLILDWDVHHGNGTQRAF
WHDGDVLYMSLHRHEGGTFYPNGDFGSLNMVGDGEGVGKSVNIPWPGPGFGDADYIYAFQ
RIIMPIAYEFNPDLVIISAGFDAADGDMLGQCHVTPAAYGHMTHMLSSLAGGKLVVALEG
GYNLRAISDSALAVARVLLGEIPPELGILRASQAATEVVYQVALEQSKYWECIDVKACEP
PEVIELENGTSPVYTIPDLLKIHRAHHMFTKHQLYQIPLASQELEAAFGGQIICNENMYE
VGEKGVLVVFVHDFGNLRVENDGARSTNIHLANSYLLDTSDAVVSWIKKRGYNIIDVNIL
KQLPTEYPEGPKMIVKQANDMESKLMKYIWDNYIELSECEKVVFIGHGTGCQAIMDLVNA
RDVEFKVKAVVQVAGLHSLVRPNPSNKEKLSWFKQCNQIYVPAEHVVLGDEKVKRRLGDA
VFTSQKAKVVDVLNDVLPRIKAFVESKVEDGLPPRAHSGSDGLYGLGGRDLVAVNGHVHV
DDVANTGTEAEATT
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacaaacgccatggacattgacacaccacccatcgcctcgacctcggcgcag
caactcaattccgtacaaacacctatacgcactacccctgttactaccatgtccatgcca
ggagcagcagcacggatagcccgtacgggttacatttacgacccactcatgatgttacat
tgcatggaaggttacatgcctactgcagagaatgtgatggataacggtgatggacatcca
gaagatcccatgaggatcaagaggatctttacgaggttggccgagcaagggttgatcagg
agaatgaagaggttggattttgaagaggtcacgtttgagcaagtgttgttggtgcatggc
gaggagatgtgggataaagtgcaagctacagagttgttgaccgaccagcaaattcaagat
accaaagagtactacgatcagctatccctctacgtctgccgcgaaaccgcccattgtgct
cgtctttctgcgggaggtgtcattcaaacatgtcgatcagtgtgcaagaatgaagtgcgt
aatgcctttgctatcgtacgtcctccgggccaccatgcagaacccaacgaacatatgggt
ttctgtttcttcaacaatgttgcggtggctaccagggagatgcagagggaaggcttggcc
aaaaaggtgttgatcttggattgggatgttcaccatggtaatggtacacaaagagcgttt
tggcatgatggtgatgtgctttacatgtcattacatagacatgaaggaggtacattctac
cccaacggcgatttcggatctctcaacatggtcggtgatggtgaaggtgtcggcaagtct
gtcaacatcccttggcctggaccaggcttcggtgatgccgattacatttatgcattccag
cggatcatcatgccaatagcatacgagtttaatcccgacctcgtcatcatttctgccgga
ttcgatgctgctgacggagacatgctcggtcaatgtcatgtcacgcctgcagcttacggc
catatgacacatatgctcagttcattggctggtggcaagcttgtcgtcgcccttgaaggt
ggatataatctccgagccatatctgattccgctctcgccgtcgcccgtgtcctcctgggt
gagatcccacccgagctaggtatcttgcgagcatcccaagccgctaccgaggtggtctac
caggtcgcgcttgaacagagcaaatactgggagtgcatcgatgtaaaggcttgtgaaccg
cctgaagttatcgagcttgaaaatggcacttctcctgtctatacaatcccggacctactt
aaaattcatcgcgcgcaccacatgtttaccaaacaccagttgtatcaaataccgctggct
agccaagaattggaagctgcattcggtggtcaaatcatctgcaatgaaaacatgtatgaa
gttggagaaaagggggtattggtggtgtttgtccatgacttcggtaacttgagagttgag
aatgacggcgcgagatctaccaatatccacctggcgaacagctaccttctcgatacgagt
gatgcagttgtatcgtggattaaaaaaagaggctataacattatcgatgtcaatatccta
aaacaattacctaccgaatatcctgaaggccccaagatgatcgtgaaacaagccaacgac
atggaatccaaattaatgaaatatatctgggacaattatattgaactgtctgaatgcgaa
aaagtagtgttcatagggcacggtacaggctgtcaagcaattatggatcttgtcaatgct
agagacgtagagtttaaggtgaaggctgtggtgcaagtggccgggttacattccttggtc
agaccgaatccgtcaaataaggaaaagttaagctggttcaagcagtgtaatcaaatctac
gtgcctgccgagcatgtggtattgggggatgaaaaggtgaagcggagattaggtgacgca
gtgtttacttctcaaaaagctaaagtagtcgacgtccttaacgatgtccttccacgaatc
aaggcctttgtcgaatccaaggttgaagatggccttccgccgcgagcgcattcgggttca
gacgggttgtacggtttgggaggtagagatttggtggccgttaatggacatgtacatgtg
gatgatgtggcgaatacaggaacagaggcggaagccaccacataa
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