Cryptococcus gattii: CGB_C3150C
Help
Entry
CGB_C3150C CDS
T02232
Name
(RefSeq) histone deacetylase 1-1 (hd1)
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03082
ATP-dependent chromatin remodeling
cgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CGB_C3150C
03083 Polycomb repressive complex
CGB_C3150C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_C3150C
Enzymes [BR:
cgi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CGB_C3150C
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CGB_C3150C
HDAC complexes
Sin3A-HDAC complex
CGB_C3150C
BRAF-HDAC complex
CGB_C3150C
REST complex
CGB_C3150C
SHIP complex
CGB_C3150C
MiDAC complex
CGB_C3150C
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CGB_C3150C
Heterochromatin formation proteins
Other heterochromatin formation proteins
CGB_C3150C
Chromatin remodeling factors
NuRD complex
CGB_C3150C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
NIL
SpvB
Motif
Other DBs
NCBI-GeneID:
10187412
NCBI-ProteinID:
XP_003192774
UniProt:
E6R363
LinkDB
All DBs
Position
C:complement(join(632761..633218,633274..633425,633480..633569,633620..633703,633763..633838,633891..633999,634056..634148,634205..634346,634395..634533,634589..634663,634730..634847,634937..635245))
Genome browser
AA seq
614 aa
AA seq
DB search
MPSSVATYPPLDFSSVRSDGRRVAYYYDHDVGNYHFGLGHPMKPHRIRMTHNLVVNYGLA
DDYETMEEEGKRKVNAQMGMENDEARWVNAELRGSRGKWMQIFRPRRATKTDMTRFHTDE
YIELLESVLPENVDALTGNGSRGLTGSDCPAVEGIFEFSSISAGGSIGAAEKLNEGTADI
AINWAGGLHHAKKTEASGFCYVNDIVLGILELLRVNSRVLYIDIDVHHGDGVEEAFYSTD
RVMTCSFHLFGNFFPGTGTLKDTGLGKGKGYAVNVPLREGITDQGFHSIFKPVIAEIMEH
YRPSVIVLQGGADSMSGDKLGRLNLSDKGHAECARFLRTFSVPLMLLGGGGYTTKNVARA
WTRETAIACGQELSEDLPSNQYMEYYGPRYKLEVLPSNVEDFNTPGYLDDLKRQISKHLK
NLPFAPSAQMRQVTGRNVSQAVGLSNEWETDDPEDQIDQRLKILFASKNLNGTYTQESDT
LLNDLTTASRIRRQGGFKTLPRSSIVFDRGRKRYLEEDVGMEEDPCCHLPAMTGKGKNRK
SIAMSDSLTPPTSAPEWRSHFTVHEMRKRPYLVETLQQLSPGIEDECDRNRRMTEGSQLH
MIGQLRRKRSFFLT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttccgttgctacgtatcctccgctcgacttctcgtccgttcgctcagacggc
cgtcgcgtggcttactactatgatcacgacgtaggcaactaccattttggccttggccat
ccaatgaagcctcatcgaattagaatgacgcataaccttgtagttaactatggattggct
gacgactatgaaactatggaggaagagggcaaaaggaaggtgaatgctcagatggggatg
gagaatgatgaagcgagatgggtgaacgccgagctgcgagggtcaaggggaaaatggatg
cagatatttagacctcgtcgagcaaccaaaacagatatgacgagatttcacacagatgag
tacattgagctgcttgaaagtgtactacctgaaaatgtggatgctctcaccgggaatggg
tcacgaggcttgacgggatccgattgcccggcagtcgaaggtatattcgaattcagctct
atttctgcaggcggatccattggtgctgctgagaagctcaatgagggtacagccgatatc
gcaattaactgggcaggtggcctacatcacgccaagaagactgaagccagtgggttttgc
tacgtcaatgatattgtcctcggtattctcgagcttttgcgagttaactcgcgggtgctc
tacatcgatatcgacgtgcatcacggcgacggagttgaagaagcgttttactccacagac
agagttatgacttgttcttttcatctctttggaaacttcttcccaggaactgggacactc
aaggatactggcctgggtaagggtaaaggctacgccgtcaatgttccattgagagaaggt
atcacagaccaggggtttcacagcatctttaaacctgttattgccgagatcatggaacat
taccgtccaagtgtcattgtattacaaggtggagcagacagtatgtctggagacaagtta
gggaggttgaacctgtcggacaaagggcatgctgaatgtgcaaggtttttgaggactttc
agtgtaccattgatgttacttggtggtggggggtatacgacaaaaaatgtggcaagggcg
tggactagagaaacagcaatcgcatgtggacaagaattatcggaagatttaccaagcaat
caatatatggaatattacgggcctcgatacaaattagaagtgttaccttccaatgttgaa
gatttcaatacaccaggatatctcgatgatctcaagcgtcagatctccaaacacttgaag
aatcttcctttcgctcctagcgctcagatgcgacaagtcaccggtagaaatgtgagtcaa
gcagtaggactcagcaatgaatgggaaacagacgatccggaggatcaaattgatcagagg
ctcaaaatactatttgcaagtaagaatttgaacggtacttatactcaagagagtgatact
ttattgaatgacttgacaaccgcttcaagaattaggcgccaaggtggtttcaaaactctc
cctaggtcttcaatagtgttcgacagagggaggaaaaggtaccttgaagaagatgttggg
atggaagaagatccttgttgtcatctgccagccatgactggcaaaggaaagaataggaaa
tcgattgcgatgagcgacagtttaacacctccaacatcagcaccagagtggcgatcacat
ttcaccgtgcatgaaatgagaaaaagaccttatctcgttgagacccttcagcaactatct
ccagggattgaggacgaatgtgatcggaaccgtcgtatgaccgagggctcgcagctgcat
atgatagggcagctcaggaggaaaaggagtttctttttgacctaa
DBGET
integrated database retrieval system
