KEGG   Cryptococcus gattii: CGB_C4290W
Entry
CGB_C4290W        CDS       T02232                                 
Name
(RefSeq) DNA repair and recombination protein pif1, mitochondrial precursor
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
cgi  Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgi03032]
    CGB_C4290W
   03029 Mitochondrial biogenesis [BR:cgi03029]
    CGB_C4290W
Enzymes [BR:cgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CGB_C4290W
DNA replication proteins [BR:cgi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    CGB_C4290W
Mitochondrial biogenesis [BR:cgi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    CGB_C4290W
SSDB
Motif
Pfam: PIF1 AAA_30 AAA_19 Pif1_2B_dom AAA_22 Herpes_Helicase T2SSE AAA_7 Viral_helicase1 AAA_16 UvrD_C_2 AAA_11 nSTAND_NTPase5 AAA_5 SLFN-g3_helicase NB-ARC NPHP3_N NACHT RNA_helicase ResIII Mg_chelatase bpMoxR PhoH Sigma54_activat ABC_tran nSTAND3 TrwB_AAD_bind AAA_14 RsgA_GTPase TsaE UvrD-helicase AAA NTPase_1 ATPase_2 DUF815
Other DBs
NCBI-GeneID: 10187463
NCBI-ProteinID: XP_003192796
UniProt: E6R3E7
LinkDB
Position
C:join(897169..897320,897371..897712,897763..897938,897983..898234,898284..898517,898567..899186,899253..899423,899474..899536)
AA seq 669 aa
MPILTARAPSASGLNNTSNRTLSRVTSFKRNWGEEDGPESSQLDWSPSPEVIQRKGNILS
SSGLLQSTTTSPSLPESAAKETASERRRRAILAALNQNKEAASASAVSDWCPVQKSSTSA
SPQDIHYGISVPPVASHCPDPSIPHVHQTLQSWPKRPLPWEGDQKARKRVYTQATLTSTE
SAQPKSTSSALNIKQRVTLSEEQQKVLTLVVQQQKNVFFTGSAGTGKSVLLREIIHALRN
KYARNPDAVAVTASTGIAACNIGGVTLHSFGGVGLATDAPEVLLRKLKMNKKASGRWTKT
KVLIIDEVSMVDGAMFDKFCKLGQLIRKNSKPWGGIQIIVTGDFFQLPPVTKNGGVPKFA
FEAEMWDETVHLSVNLTKVFRQKDQRFVDMLNEMRFGRLSNESVIAFKSLARPLKFNDGI
EPTALFPRREDVDRANLSRLNQLDSVGFTYHAIDGGSAEANQREKLLSNFMAPKIIELKE
NAQVMLVKNLDETLVNGSMGKVIGFTYKNMFQCDDLGRWTPDADLKELEEEDKMKSLAVR
QALRDKYQAKGANPLPVVRFKVPGGGTRDVLMEMDVFKAELPNGEVQASRSQLPLILAWA
MSIHKSQGQTLDRVRVDLGKVFEKGQAYVALSRATSLEGLQVTGFTAEKVMAHRKVTVWS
STLKDLNLV
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgcctatccttacggctcgcgcgccctcagcatccggcctcaacaatacgtcaaacagg
actctctctcgcgttacctctttcaaacgcaattggggagaggaggatgggccggagtct
agtcaactggattggagtccaagcccagaagtcatccaaagaaaaggcaatatactgtca
tcttcaggccttttacagtccacaacgacatcgcccagtctcccagaatctgccgcaaaa
gaaactgcatctgaaagacgccgcagagctatccttgctgcattaaatcaaaacaaagag
gccgcatcggcctctgcagtttcggactggtgtccagtgcaaaaatcatctacttctgct
tcgccccaagacatccattatggtatttcagttccacccgttgcgtctcactgccccgac
ccttccataccccatgtgcaccagacactccaatcttggccaaaacgaccgctaccttgg
gagggtgaccagaaggctcgcaagagggtttatactcaagccactttgacatcaacggaa
agcgctcagccaaaatcgacaagctctgcccttaacatcaaacagcgtgtgactcttagc
gaagagcagcagaaggttttgactctggtagtacagcagcaaaaaaacgtgttcttcaca
ggtagtgccggtactggtaaatctgttctactacgggagattatccatgctttacgaaat
aaatacgccagaaacccagatgctgttgcagtaacagcttcaacaggaattgcagcttgc
aacattggcggagtgaccttacattcatttggtggcgttgggcttgccacagacgcgcca
gaagtgcttctcaggaaactcaaaatgaacaaaaaagcatcaggaagatggacgaaaaca
aaggtgttaattatcgacgaagtgtctatggtagatggtgctatgtttgacaaattttgt
aaactcgggcaattaattcgcaagaatagcaaaccttggggaggtatacaaatcattgtg
actggggactttttccagttaccccccgtgactaagaacgggggtgtgcccaaatttgct
ttcgaggcggagatgtgggatgagacagtccatctgtctgtgaatcttacgaaggtattc
cgtcaaaaggaccaaagattcgttgatatgctcaatgagatgcgttttggtcgcctttct
aatgaatcggtcatcgctttcaaatctcttgcacgccccctcaaattcaatgatgggatc
gaacctaccgccctcttccctagacgtgaagacgttgatcgcgccaacttgtcacgcctc
aatcagcttgactccgtcggcttcacttatcatgccattgatgggggcagtgcagaagca
aatcaacgcgaaaaactcctttctaatttcatggcgcctaaaataattgaactcaaggag
aacgcacaggtcatgctagtcaaaaatctggacgagacccttgtaaatggttcaatgggc
aaagtgattggattcacgtacaagaatatgtttcaatgcgacgatttgggcagatggaca
cctgacgctgacctgaaggaactggaagaggaggataagatgaaaagtttagcagtcaga
caggcgttgagagataaataccaagccaaaggagcaaaccccttaccggtcgtgcgtttc
aaggtgcctggaggcggtacaagggatgttctgatggaaatggatgtctttaaggcggaa
ctgccaaatggggaagtacaggcgtcgcgatcacagttgccactgatccttgcgtgggcc
atgtcaatacacaaatcacagggacagacccttgatcgtgtgagagtcgacctcggcaaa
gtcttcgaaaagggtcaggcgtatgtggccctctcccgagcgacatctctggaaggatta
caggttacagggttcacagcagaaaaggtgatggcccataggaaggtaactgtctggtcc
agcactctcaaggatttaaatctcgtatga

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