Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12605 | CCR4-NOT transcription complex subunit 2 |
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Organism |
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cgi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_C5210C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cgi03019]
CGB_C5210C
Messenger RNA biogenesis [BR:cgi03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CGB_C5210C
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CGB_C5210C
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
C:complement(join(1044292..1044646,1044692..1044901,1044954..1045324,1045377..1045666,1045736..1045841))
|
AA seq |
443 aa
MFYATAGQQATQQPPTSRIAGYPRSGPPGFGVRSSDPNDFPALGSHSQHNSSYIAQNQSG
QGSANASHQNTHLQQQQLYMQQQQQQQQQLGVTPTPPPGISGPTAGASSQSNGGLTEEFP
ALGASSESKDGRMANFLRNPSSVHQPVPSSPSPLPNGTSSASASQSANATPSTNPPHPQS
GMGGPASTTDSWQRQSPRHTEPVVRPVQQILSSPVDRWGLKALLFEIQMHMNKTDRGMMV
FGEDLEELGVDINSEEALYPTFVTPWVEPNSLPPPQIEESFHIPQCYYVHAPPVESKLQN
FAEDTLFLAFYMSPQDVLQLRVAEELFARGWRYHTELQTWLTSPTLATIDLSKADRSSGQ
PNWIRGPFAYLDTRTWVRQRTAEDFTIDANVLELTKRADDVIREEAARKEAQKSPSNVPV
NGQGQVQSQGQQQNQGQTLSYQR |
NT seq |
1332 nt +upstreamnt +downstreamnt
atgttctacgcgacagcaggccagcaagcaacccagcaaccaccaacatcaagaatcgct
ggctacccaagaagcggtcctccggggtttggtgttcggagctctgatccgaacgatttc
ccagctcttggatcacacagtcagcataattcgagctatattgcccaaaatcaaagcggc
cagggttcagccaacgcaagccatcagaatactcacttacaacaacaacagctgtacatg
caacaacaacaacagcagcagcaacagcttggtgtcactcctactcctccgccggggata
tctggtccaacggcgggcgcgtcgtctcaatcgaatgggggtttgacagaagagtttcct
gctctcggggcatcttcagaaagcaaagacggtcgtatggcgaactttcttcggaatccg
tctagcgtacatcaacccgtcccttcctctccttcaccattacccaacggtacaagcagc
gcgagtgcatcccagtccgcaaatgcgaccccttcaaccaatccaccacatcctcagtct
gggatgggtggacctgcatctacgactgactcatggcaaagacagtcaccaagacataca
gaacctgtggtacgacctgtacagcagatcctgagctccccggtggatagatggggattg
aaggcgctgctatttgagatacaaatgcatatgaacaaaacggatcgcggaatgatggtg
tttggagaagatctggaggaattgggtgtggacataaacagcgaggaggcgctctacccc
acatttgttaccccatgggtggaacccaactcattaccgccacctcaaattgaggaatca
ttccacatcccccagtgctactacgttcatgcgcctcctgtagaatccaaattgcaaaac
ttcgcagaagatactctgttccttgccttttatatgtctcctcaagacgttttgcagctc
cgtgtcgcggaggaactgtttgcccgaggatggcgttatcatacagaattacaaacatgg
ctcacctcccctactctcgcgaccattgatctctccaaagccgatcgttctagtgggcaa
ccaaactggatccgtggtccatttgcatacctcgacactcgaacatgggttaggcaaaga
acggcggaagactttaccatcgacgccaatgttcttgaacttaccaaacgggcagatgat
gtcattcgagaggaggcagctagaaaggaggcacagaaaagccctagcaatgtccccgtg
aatggtcaaggccaggttcaaagccagggtcagcaacaaaatcaaggacagacgctttcg
tatcagcgatga |