| Entry |
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| Name |
(RefSeq) exosome complex exonuclease RRP6
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| KO |
| K12591 | exosome complex exonuclease RRP6 [EC:3.1.13.-] |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cgi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_C6050C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cgi03019]
CGB_C6050C
Messenger RNA biogenesis [BR:cgi03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
CGB_C6050C
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
C:complement(join(1190874..1190971,1191026..1192221,1192274..1192748,1192804..1192903,1192959..1193546,1193598..1193696))
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| AA seq |
851 aa
MPHKDINLDELRGGKGKTAITVKPSLAAQAGKKIPGPFVERLPANIIHASDLTKPQLLFH
DAPDNARTSESWKPSLTTKPHAMVPLGFKAPLDYELTSEEEMDPSKAALRREKEIRARTH
PYYYETKHLPYPTSLFIDSKPVPPQSFDETPFEFVDTPEKFHRMVGKLKQAKEIAVDLEH
HDMRSYSGFTCLIQISTRENDWVVDTLSLRKEIQQDKFGDVFTDPTVVKVFHGADSDIVW
LQRDFEIFVVNLFDTYNACVVLGMPQRSLSALLQHYCNFEADKRYQRADWRIRPLPDGML
NYARSDTHFLLFIYDNLRNALLHKSSRPSSPAASGTIVLDSAKPNPQEAMREVLDKSAET
ALKMYERDSYDIETGRGSGGWLAAGKKWLPKGEIEQESGWVWRHLHDWRDRVAREMDESP
FYVMPNNMLRDVSTADNTANLSRIIRRDRAPIAAQYIPEITSIIVAAKKKFKEIRTERAT
NPQVQEMEKIEAKEIGANDVKKVALAVPAVPSVPLASTASNIWNVAVKPTSTRANAKSGL
FGTTIKSSPLKHASGYATTPNSGQSALFGVTLNQTNNQKSASAALTLRERELSPGFLKVM
ESMRMDLHPRGMASGSSEGTVEKGLSPETVPFIPSNQRKTTATPSLEARGKKSFGLTTES
SHLLLPGQKASSPAAFASDMSSQKSSKFGTVDEGVVQVKKSKKQKKRERATTADGAGDDS
DSKKAKLNADGDEGFGAATPPDQAVITTAVEPSNTVNVGKRGDVKKSTTFKKKTKVKPQD
IPAFDYANQPNLLDQPQSSAMAQVDTKKKKKKVKEARPSGAGIVEVPTFGARPARDLSQP
KQGNKSGTFAK |
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| NT seq |
2556 nt +upstreamnt +downstreamnt
atgcctcataaggatatcaaccttgatgaattgagaggtggcaagggaaaaacggctatt
acggtcaagccatccctggccgcccaagctggtaaaaaaattcccggcccgttcgttgaa
cgtctgccagcaaacatcatccatgcgtctgatcttaccaaacctcagcttctattccat
gacgcccctgacaatgctcggacatctgaatcctggaaaccgtctttaacaactaagcca
catgctatggtccctctgggattcaaggcacctctcgattatgagctgacctcggaagaa
gagatggacccgtcaaaggcagctctaaggcgggagaaagagattcgcgcccgaacacat
ccatattattacgaaactaaacatttaccatatcccacctcattgtttattgattcaaaa
cctgtaccccctcagagcttcgatgagacgcctttcgagtttgtcgatacgccggagaaa
tttcaccgaatggtcggaaaactcaagcaggcaaaagaaatcgccgttgatctggagcat
cacgacatgcgaagctattcaggtttcacgtgcttgatacaaatttcgactagagaaaac
gattgggtcgtagatacactgtcgcttaggaaggaaatccagcaagataagtttggagac
gttttcaccgaccccactgttgtcaaggtctttcacggtgccgatagtgatatcgtctgg
ctccaacgggatttcgaaatctttgtcgtcaatttgttcgatacatataatgcctgtgtc
gtcctcggaatgccacagcgatctctctcagcccttcttcagcactattgtaacttcgag
gccgacaaaagatatcaacgggccgattggcgaattcgtcccttgccagatggcatgttg
aattatgcacggtctgacactcatttccttcttttcatctacgataatcttcgcaacgcc
cttcttcacaagtcttctcgtccttcttcgccagctgccagtggtactatcgtcctggat
agtgccaagcctaatcctcaagaagctatgcgtgaagtccttgacaagtctgctgagacg
gccttgaaaatgtacgagagagattcttatgatatagagacgggacgaggctctggaggt
tggctggctgcaggaaaaaaatggctacccaaaggagagattgagcaagagtctggctgg
gtttggaggcatttgcatgattggcgggatcgggtggcaagagagatggacgaaagccct
ttctatgttatgcccaacaacatgttacgagatgtcagtacggctgataataccgccaat
cttagtcgtataatcagaagagatcgagctcctattgcggctcaatacattcctgaaatc
acatctattattgttgccgcgaagaaaaaattcaaggagatcaggactgagcgagccact
aatcctcaagtccaggagatggagaagatagaagcgaaggaaatcggagcgaacgatgtg
aagaaggttgcgcttgcagtaccggctgttccatctgtacccctagcaagcaccgcttca
aatatatggaacgtcgctgtcaaacctacctctactagagcaaatgccaaatcaggtctt
ttcggcactaccatcaaatcttctccactcaagcatgcttcgggttatgctactactcca
aattcagggcagtcagctttgttcggtgtgacactgaaccaaacaaacaatcagaaatcg
gcatctgctgctttgacccttcgtgagagagaattgtcccccggtttccttaaagtgatg
gagtctatgcgcatggacttgcatcccaggggtatggcatcgggaagcagtgaaggcact
gtggaaaaaggattaagccctgaaactgttccatttatcccttccaaccaaagaaaaacg
actgcgacgccatccttggaagcgagggggaagaaatcttttggtttgactacggagtcg
tcacacctcctgctacccggtcagaaggccagctctcctgctgcttttgcatcagatatg
tcttctcaaaagtcatcaaaatttggaacagtcgacgagggcgttgtgcaggtgaaaaaa
tcgaaaaagcaaaagaaaagggaacgagctactaccgccgatggagccggtgacgacagc
gatagtaaaaaggccaagttgaatgctgatggcgatgaagggttcggtgctgccacgccg
ccagatcaggctgtgataacaacagctgttgagccttcgaacacagtaaatgttggaaag
aggggcgacgtcaagaaaagcacgacttttaagaagaagacaaaggtgaagccccaagat
ataccggcatttgattacgccaatcaacctaatctattggatcaaccacagtcttctgcg
atggcccaggttgatacaaagaagaagaaaaagaaggtcaaagaagcaaggccttcagga
gctgggattgttgaggtaccaacatttggggcaagacctgcgagggacttgagccagcct
aagcaaggtaataagtctgggacatttgctaaatag |
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