Cryptococcus gattii: CGB_C6440C
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Entry
CGB_C6440C CDS
T02232
Name
(RefSeq) nucleoporin-interacting protein NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
cgi
Cryptococcus gattii
Pathway
cgi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CGB_C6440C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C6440C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CGB_C6440C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
10187737
NCBI-ProteinID:
XP_003192969
UniProt:
E6R1S1
LinkDB
All DBs
Position
C:complement(join(1280425..1280739,1280789..1281480,1281531..1281648,1281700..1282348,1282401..1282513,1282689..1283069,1283126..1283372,1283430..1283650))
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AA seq
911 aa
AA seq
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MSTNTPYRPHNHGPATRPPAASALSSLLAQANSLNEADYDSELPQIRFGIDDIERMSEVV
AGRGKRVKSEKGEAFNLLSNLGVNTSQLAHSISQLPSEPAAPRPRRRRAAQVQAQAAEQV
PELGRGFVAAEGDIGTWGRNWHEMVILSGIEMQRQRIINSFQKQFQQRILQNWQLEKARV
LQDELGVTDDELAGIVDAARLASSALGSSSLGRSALGASTRRFPMGQSTLGKSTTAESRE
GGLVMHTKMVRYERAIGELNQKRLRKEPYEFCQALSESTKNDSPVNERQYSAAYLGDQKA
HQAALLRGRLVTGGLKYLERDFERHVDETIARNPKEAALGGVPGIRNKIRAFVDVTLRTK
EAREAYKPETVNGTLLWAQTYYLVRCGYIDDALNLVAENQQHISRDDWSFPGCFKSAMQS
PERRLSKTQRDQLYNDFNAHIRNNPLIDQFKAALYKLVGRFELNRKTAKVATTTEDWMWL
QLNLVRENRDGDAPQEQYDLADLGRLLEKYGSDKFDANGTKPLAWFNLLLFTAQFEKAVA
YLYSKPQMKTDAVHFAIALSYYGLLRVPPKGDEAELLAVSDSSDVSFLNFARIIKQYIAP
FFKLEPQTALQYAYLVMLNSDAPAPSGPKQRQLCLELVRDIVLSSRSWSRLLGSVRADGS
KEIGVIERDLKLLKLEDEQDYLRQVVLAAADQSSLDSSLTDSIELYHLAGSYDKVVETVN
RALGHSLSQTAGAAPLPSDAAQVGLTVAFGGAPDLYSLAQKVHAVYERDFGKRTRVSSLH
WETLETLLQLKLALAQFAADRPDLALETFKATNLLPLDNDPSSITRYAQKFRDMLDQPVI
SNLDDVIVTTMKCLHLLSQQLKQSPYGDQGRAAQLSVYKHQAQCLIQFASTLRLRLGPDV
YRQLSSMSAFF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaatactccatacagacctcataaccatggcccagcaacaagacctccagcg
gcatccgctctttcctcactgctcgctcaggcaaactccctgaacgaagccgactatgac
tcggagcttccacagatcaggttcggcatcgacgatatcgagaggatgagcgaggttgtc
gcaggaagaggcaagagagtaaaaagcgaaaagggagaggcattcaacctcctctcaaac
ctcggtgtcaacacttcccagcttgctcactcaatatctcaactcccatccgaacctgct
gcaccacgtcctcgtcgtcgccgtgctgctcaagttcaagcacaagcggccgaacaagtg
ccagagctcggacgtggtttcgttgcggctgaaggtgatatcgggacatggggcagaaac
tggcatgagatggttatcctgagcggtattgagatgcagagacaaaggattatcaattct
ttccagaaacaattccaacaacgaatcctccaaaattggcagctcgagaaggctcgagtc
ctccaagacgaactaggtgtgaccgacgacgagcttgcaggtatcgttgatgccgctcgg
ttggcttcaagcgcattgggcagctcatccttgggcaggagcgccctgggagctagtaca
agacggttccccatggggcaatccaccctaggcaaatctacaaccgcagagtcaagggaa
ggtggtttggtcatgcacaccaaaatggtgaggtacgagcgggccattggggagctcaac
cagaagcgtttgcggaaggagccatacgagttttgtcaggcattgtcagaaagtaccaag
aatgactctccggtcaatgaaaggcaatattctgcagcatatctcggtgaccaaaaggct
catcaggcggcactattgaggggaagattggtgactggtggacttaaatacctcgaaaga
gactttgagaggcatgtcgacgaaaccattgcgaggaaccccaaagaggctgctcttggc
ggtgtaccaggcatccgtaataagattcgtgcctttgtagacgttactttacggacaaaa
gaagctcgagaggcatacaaacctgagactgtcaacggcactcttctctgggcccagact
tactatctcgtccgatgcggctatattgatgatgctctcaatcttgtggcggagaatcag
caacatattagtcgtgacgattggtctttccccggttgtttcaagtcagccatgcaatct
ccggaacgccgactgtccaaaactcagcgagaccagctttacaatgatttcaacgctcac
atccgtaacaatccgcttattgatcaattcaaggccgccttgtataagcttgttggcaga
ttcgagttgaaccggaagaccgccaaagttgcgacgacgactgaagactggatgtggttg
cagttgaacttggtaagagagaacagagatggagacgcacctcaggagcagtacgacctg
gcggatctggggagattgttggaaaagtatggcagtgacaaatttgacgccaatggtaca
aaaccattggcttggttcaatttgttgttgttcactgcacaatttgaaaaagcggtagcg
tacttgtattcaaagcctcaaatgaagaccgatgctgtacactttgccattgccttgtcg
tactacggtcttttgcgagtgccccccaagggtgatgaagccgagttattggctgtgagc
gactctagcgacgtatcgttcctcaattttgcccgtatcatcaaacagtacatcgctccc
ttcttcaagcttgaaccgcaaactgctcttcaatatgcctatctcgtcatgctcaacagc
gatgcaccagctccttcaggccccaaacaaaggcaactgtgtctcgagctggtccgagat
atcgtgctttcttcccgaagctggtctcgtctgctgggcagtgttcgtgcggatggcagc
aaggaaattggtgtaattgagcgtgacctcaagttgctcaagcttgaagacgagcaagac
tacttgcgccaagttgtactcgctgctgccgatcagtcatctcttgattcttcccttaca
gactccattgagctataccaccttgctggctcatacgacaaggttgtggaaacagttaac
agagcccttggtcactcacttagtcagacggctggcgcagctcctctccccagcgatgcc
gcacaagttggactcaccgttgctttcggtggagctcctgacctctatagtttggcacaa
aaggttcatgctgtctatgaaagagactttggcaagagaacgagagtgtcgagtttgcac
tgggagacattggaaacgcttttgcagctcaaattggcgttggcgcagtttgctgcagac
aggcctgatctggcattggagacattcaaagccaccaacctcctcccacttgacaatgac
ccatcatctattacacgctacgctcaaaagttccgggacatgttggaccaacctgtcatc
tccaaccttgacgacgtaattgttacaactatgaagtgcctccatttgctttcgcaacaa
ctcaaacaatcgccctatggcgatcaaggccgcgcggcgcagttgagcgtctataaacat
caggcacagtgcttgattcagtttgcgagcacgttaaggttgagattaggaccggatgtg
tataggcagttaagttccatgagcgctttcttttaa
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