Cryptococcus gattii: CGB_C7440C
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Entry
CGB_C7440C CDS
T02232
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_C7440C
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_C7440C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C7440C
03041 Spliceosome [BR:
cgi03041
]
CGB_C7440C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CGB_C7440C
mRNA degradation factors
5'-3' decay
Lsm complex
CGB_C7440C
Spliceosome [BR:
cgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CGB_C7440C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Harpin
GRP
Motif
Other DBs
NCBI-GeneID:
10187981
NCBI-ProteinID:
XP_003193040
UniProt:
E6R1Z9
LinkDB
All DBs
Position
C:complement(join(1491209..1491309,1491370..1491402,1491465..1491561,1491666..1491815,1491905..1491946,1491996..1491998))
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AA seq
141 aa
AA seq
DB search
MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMF
IKGNIIKYFRIADDILEQAAAEQDKARAANRARGGTRGGRGGPGGARGGRGGPPGRGGGP
GRGGFNQRGRGGPPRGGAPRP
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctctcacttcttacagccgctcaaggcaagccaatgcttgtggagctgaag
aatggagtcaccttcaacggccatctagtcgaatgcgacactttcatgaacgttactctt
cgagaggtttaccaaacttcagcggacggcgaacgattctggaaaatgaaggagatgttt
attaagggtaacattatcaagtacttccgtatagcagacgacattctggaacaagcagct
gcggaacaggacaaggcgcgagcagcgaacagagcacgaggtggaactagaggtggacgg
ggtggaccaggaggtgcccgaggaggtcgaggtggaccacctgggcgagggggtggaccg
ggacgtggcggattcaaccaaaggggtagaggaggaccacctagaggcggagcgccgcga
ccataa
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integrated database retrieval system
