Cryptococcus gattii: CGB_C8600C
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Entry
CGB_C8600C CDS
T02232
Name
(RefSeq) RNA binding protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cgi
Cryptococcus gattii
Pathway
cgi03013
Nucleocytoplasmic transport
cgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CGB_C8600C
03015 mRNA surveillance pathway
CGB_C8600C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C8600C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CGB_C8600C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
10188191
NCBI-ProteinID:
XP_003193105
UniProt:
E6R290
LinkDB
All DBs
Position
C:complement(join(1728082..1728825,1728874..1728986,1729067..1729352))
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AA seq
380 aa
AA seq
DB search
MPARGRSTTPKSLTPDRSPARSYPSRSRSPSRSRSRSPIPRKASLRDADNDASGGGKYKV
IVVSGLSKNVIKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDNPAAASKAVKCM
DGGQLDGSFLNVQRQISEHPLPPPQAPSPRRRSPSPSRSRSPPARRRRSPSPRSCSPSPR
RGGPRASYGRRRSYSRSRSPPRYRGGRDSFPGRNSNGFGPGPSGGRGGGGAGRGGFSRGA
GPLPPGGRDNGWRRERSPPVPVPVPVRKWGERGAPRRASPEYGRGARSVSRSVSPRGPRG
GARSRSPVRRRESVSKSRSPVRRRSRSRARSYSRGRSVSMSRSRSPPPRKRYSPSRSRSR
SSTRSMSIDRSRSNTRSPRK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaagaggccgatcaacgacgcccaagtcactcactccagaccgttctccggcc
aggtcttatccctctcgatctagatccccctccaggtctaggtcaaggtcacccattcct
cgaaaggcttctcttcgagatgccgacaacgacgcgtccggaggtggcaagtacaaggtc
atcgtggtatctggattgagcaagaatgtcatcaagggccatttggatgagattttctca
gagtatgggcgaatcactgggattgatttgccgttgtttaaagtttctggactgaacaag
ggtaaagctgcaattgagtttgataaccctgccgcggcgtcaaaggcggtgaagtgtatg
gatggtgggcagctggatggatctttcctcaacgttcaacgacagatttctgaacatcct
ctccctcctcctcaagccccttctcctcgtcgccgatccccgtctccttcgcgcagccgc
tctcctcctgctcgtcgtcgccgttcaccctctcctcggtcttgttctccctctccccgt
cgaggcggtcctcgcgcttcttacggtcgacgccgttcatactctcgttcacgttcacca
cccaggtaccgcggtggacgagactcattccctggacgaaacagtaacggtttcggccct
ggaccttccggcggccgaggtggtggtggtgctggtcgaggaggattctcaagaggcgcc
gggccactccctcccggaggaagggacaatggatggaggcgagagaggagcccccctgtg
cctgtgcctgtgcctgtgcgtaaatggggtgagcgtggtgcgcctaggagggcgtcgcca
gaatatggccgtggtgcgaggtcagtctcgcgttcggtcagcccgcgtggtccgcgtggt
ggtgcgaggtcgcgttcgcctgtcaggcgccgtgagagtgttagtaaaagcaggagtccc
gttaggaggaggagtaggagtagggcgaggagttattctaggggacggagtgttagtatg
agcaggagcaggtctcctccccctaggaagaggtacagcccaagcaggagtaggagtagg
agcagcaccaggagcatgagcattgataggagtagaagcaacaccaggagccctaggaag
taa
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