KEGG   Cryptococcus gattii: CGB_D0430C
Entry
CGB_D0430C        CDS       T02232                                 
Name
(RefSeq) RNA cap binding protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_D0430C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_D0430C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CGB_D0430C
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CGB_D0430C
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 10190983
NCBI-ProteinID: XP_003193285
UniProt: E6R5B2
LinkDB
Position
D:complement(join(124726..124815,124883..124960,125017..125207,125256..125324,125428..125482))
AA seq 160 aa
MDALIPFTTSGSLVDLVDKKVLVILRDGRKLLGVFRSYDQFAFLLQPLCFDGILHILGIL
MQHANAANFLLESCVERLHYKLEYADKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNL
QEIEEKISAENKQRERDHAVKESVLSKMGFVNEGKEGDAY
NT seq 483 nt   +upstreamnt  +downstreamnt
atggacgctctcatcccgttcacgacttccggttcactggttgaccttgttgacaagaaa
gtgctcgttattctgcgagacggtaggaagttgttaggtgtttttaggagttacgaccaa
tttgccttcttgctgcaaccattatgtttcgacgggattttacatatacttggcatcctg
atgcaacatgcgaacgcagccaacttccttcttgaatcatgtgtagagagattacactac
aaactagaatatgccgacaaggatatcggagtgctgttagtgcgaggggagaatgttgtg
gctttgggagaaattgatctgatagcagaagacatggtacctttacaacaagtaaacttg
caagaaattgaggagaaaatttccgctgagaacaaacaacgagaacgagaccatgctgta
aaagagtctgtgttatcaaagatgggctttgtgaacgagggcaaggagggcgatgcgtac
tag

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