Cryptococcus gattii: CGB_D1810C
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Entry
CGB_D1810C CDS
T02232
Name
(RefSeq) WD-repeat protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cgi
Cryptococcus gattii
Pathway
cgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGB_D1810C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_D1810C
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CGB_D1810C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Utp12
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
CFAP251_N
ASA1
Beta-prop_Vps41
DSE1_N
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
AP3D1
Beta-prop_NWD2_C
Tricorn_2nd
Afi1
Motif
Other DBs
NCBI-GeneID:
10191036
NCBI-ProteinID:
XP_003193351
UniProt:
E6R5M4
LinkDB
All DBs
Position
D:complement(join(418063..418368,418420..418971,419026..419427,419478..419999,420045..421193,421242..421277))
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AA seq
988 aa
AA seq
DB search
MVRSYMRHGPTQAFGIICSPTANSSYNGRLAYVPGWEDVLVWDTKRGEMVAMWHSTGLTS
PVTYLTPAPTPYTSTSTTPVTFAVSYQDGSIRLWSYDPSTPDVEASEIVTFNGHKKSVTI
MTWDHDASRLASGGTEGEIVVWDRIGEVGLFRLKGHRAPITGLAFIPHPRGGHPGWLVST
SRDTYLKVWDLGTQHCVQTVVVGRGEVTSLAVREEAEESIIGQDEDESEGEEYIKGRWVV
VTGSGDGEAQVYTIEKSQLARGMAEDENGELPTLIASLCTLPLPSSTHPISQITWHPTLP
LLSLQTSDRGIAILRLRTEEEVNAKRARRKKRDREKKKKGKSDKQKDEDKEEDEKDEPVK
WEERVAIWCMVRANAKIKSFAFADENVASVKGGVSLLLALSNNSIESYTIPTPGSKSKLA
DGATPEPTKTHSIELPGHRQDIRTISISSDDQVIASASSGTLKLWNARTTACIRTMECGY
ALCSTFLPGDRHVVIGTKAGELMLYDVAASSLLKTYKAHSGPVWSVSIRPDGRGLVSGSA
DKDVKFWDFEMREEGEGERVVSRLGVETIYKTKQLALVHVRTLKMTDDILSLKYSPNGRF
LAIALLDSTVKIFFSDTLKFFLSLYGHKLPVLSLDISSDSKLLVTCSADKNVKIWGLDFG
DCHKSIFAHDEAVMGVMFEKEAGSHNFWTVGKDRMVKYWDGDKFELIQKLSGHHGEIWAL
STSQSGQFVVTGSHDKSIRIWEKTDEPLFLEEEREKEIEAMYDSNLADTLNREPGEGEGE
GDEAEAVQKQTTETLIAGEKIMEAIDLADADRATTRQWEEDNAKSNVEIPRPPRNAELIS
RGDLEPDEYVLKVVQKIPAAQMEDALLVLPFRMVVSLMGYLDEWAIQGKEIILVSRILFF
LLRTHSSQIVSNRIMRTPLLTLRHHLRDALAQQRDVMGYNLAALKFLKGRWESERVAGLY
EQEDLDEEVVRKRLEEGRGKRKRIEVRA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggttaggtcatacatgcgccacgggcctacacaggcctttggcattatctgttcaccc
acagcaaactcctcttacaacggcagactggcctatgttccaggatgggaagatgttctc
gtttgggatacaaagcgaggagaaatggttgccatgtggcattctacggggttgacttca
ccggtgacttatcttactcctgcccccacgccctacacgtctacttcaactactccggtc
acttttgcagtctcatatcaagatggttcgatccgtttatggtcgtatgatccctccaca
cccgatgtggaagcttctgaaatcgtcactttcaacggccacaagaagagcgttactatc
atgacttgggatcatgatgcttctcgattggcgtccggtggtaccgaaggcgagatcgtt
gtttgggatcgcattggagaagtcggtcttttccgtctcaaaggtcaccgtgcgccaatc
accggtcttgcatttattccccaccctcgcggagggcatcccggatggctcgttagtacg
agcagagacacttacttgaaggtgtgggatttaggaactcagcattgtgttcagacagtt
gttgtagggcgcggggaggtgactagcttggctgtgcgagaagaggctgaagagtcaatt
atcggtcaggacgaagatgaatctgaaggtgaagagtatatcaagggtcgatgggttgtc
gttacgggaagtggcgacggtgaagcacaggtctacactattgaaaaatcccagcttgca
aggggtatggccgaggacgagaatggggaacttcccactcttatagcctccctttgcact
ctccctctcccttcttccactcaccctatctcccaaattacctggcatcccactcttcct
ctgctgtctttacaaacttccgaccgcggtatcgccatccttcgtttgaggaccgaagaa
gaagttaacgcaaagagggctagacgaaagaagagggatagggagaagaaaaagaaggga
aagagcgacaagcaaaaagacgaagacaaggaggaggatgagaaggatgaacctgtcaag
tgggaggagagagtggctatctggtgtatggtcagggctaatgctaaaattaagagcttt
gcctttgccgatgaaaatgtagcttctgtcaagggtggcgtatctttgcttttggcgttg
tccaacaactccatcgaatcatacactattcctactccaggaagcaagtctaagcttgcc
gatggagctaccccagaacccaccaagactcactccatcgaacttcctggtcatcgacaa
gacatccgtaccatttctatctcttctgacgaccaagtcatcgcgtcggcctcatctggt
accctcaagctctggaatgctaggacaacagcgtgcatcaggactatggaatgtggttac
gccctctgttcgaccttcttgccaggtgataggcatgtggtgattggtaccaaggcggga
gaattgatgctctacgatgttgctgcgtcgagtctgttaaagacctacaaagctcacagt
gggcctgtttggagtgtgagcattcgacctgatggcagagggttggtcagtggtagtgcg
gacaaggacgtcaagttttgggactttgagatgagggaagaaggcgaaggcgagagagtt
gtcagtcgcttaggcgtcgagacaatctacaagaccaagcaactcgctctcgtccacgtt
cgtactctcaagatgaccgacgatatcctttctctcaagtactctcccaatggccgtttc
cttgccatcgcccttcttgattcaaccgtgaagatcttcttctccgacactctcaaattc
ttcctctccctttatggccacaagcttcctgttctgtcacttgacatttcttcagacagc
aagctccttgtgacctgttccgctgacaagaacgtcaaaatctggggtttggacttcgga
gactgtcataagagtatttttgcgcacgatgaagctgtcatgggcgtcatgtttgaaaag
gaggctggaagtcacaacttctggacagtcggaaaggacaggatggtcaagtactgggat
ggtgacaagtttgagcttatccaaaagctttctggtcatcatggcgagatttgggctctt
tccacttcgcagagcggtcaatttgtcgtcactggttcccacgacaaatctatccgtatc
tgggaaaagactgacgaacctctttttctcgaggaagaaagggaaaaggagattgaggcc
atgtacgattccaacctcgctgatactctgaaccgtgaacctggagaaggcgagggtgaa
ggtgacgaggccgaagccgtccagaaacaaactactgaaactctcattgcgggagagaag
ataatggaggctatagatcttgccgacgccgaccgtgcaaccacccgtcaatgggaggaa
gacaacgccaagtctaatgtcgaaattccgcgtccacctagaaatgccgagctgatctct
cgaggagatttggagccggatgagtatgtgttgaaggttgttcagaagattcctgcggcg
cagatggaggatgctttactggtcttgcctttcaggatggtggtcagtttgatgggttac
cttgacgaatgggccatacagggcaaggagatcattttggtgtctcggatcctcttcttc
cttcttcgaacacactcctcccagattgtgtccaaccgcatcatgcgaacgccccttctt
acgctccgacaccatttgcgtgatgccttagctcaacaacgcgacgtgatgggttacaat
ttggcagcactcaaattcctcaaagggagatgggaaagcgagagggtggctgggttgtac
gagcaggaagatttggatgaagaggtagttaggaagaggttggaagaaggcagagggaag
aggaagagaattgaagtcagggcataa
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integrated database retrieval system
