KEGG   Cryptococcus gattii: CGB_D3130C
Entry
CGB_D3130C        CDS       T02232                                 
Name
(RefSeq) pre-mRNA splicing factor
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_D3130C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_D3130C
Enzymes [BR:cgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CGB_D3130C
Spliceosome [BR:cgi03041]
 Complex C
  Other components
   Step II factors
    CGB_D3130C
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD S1 AAA_22 AAA_30 AAA_19 EDC4_C nSTAND3 AAA_16 PhoH IF3_C T2SSE Cas3-like_C_2 OB_RRP5_4th ATPase
Other DBs
NCBI-GeneID: 10191230
NCBI-ProteinID: XP_003193532
UniProt: E6R5X1
LinkDB
Position
D:complement(join(743286..743336,743385..743545,743599..743718,743776..743850,743904..743942,744009..744111,744177..744686,744733..745256,745310..745433,745481..745723,745775..746102,746156..746316,746363..746561,746611..746767,746821..747472,747522..747641))
AA seq 1188 aa
MSTDKELYKLELLSLVSKVSQELFNHTKLQDKKLAEFVIALHEQSKTTEAFQKKLNEIGA
DFPEWFIKNLDRLIVTMHPKYKRKAAKMKTSGQSRKSGDGQSIMDEQKQLQARKFPGLSM
PDQEWGPAEKYVDERAAKELHETLPESLSTGDTVAQLESIASRRNRPAAEDYLDGEPTAK
KMRSTISSGHDGSSGRGGEYEAGGFRDSSRHGRPTLDERPVLYKIYNGTIANITDFGAFV
TLDGVERRVNGNQRSNEGLVHVSNITNGRVNSARDFLKRGQRVKVKVMTVSPKIGLSMKD
VDQDTGYDLSPHLTVQTAEEAAMQQQRMSSYAASGSNSTPLLAVDERQRSSAKRLSSPER
FEIKQLIASGAVSAADYPDLDEDFSTNVANHEIEEDIDVEVNEVEPAFLSGQTKVTLELS
PVKIIKAPDGSLNRAALAGASLANERRDLKRLEANEQADAETREINQPWLDPMANQNERQ
FASDIKGNLLGQKAAQTPAWKAANKVVSYGKITSMSIQEQRRSLPIYKLREQLVAAIRDN
QILVVVGDTGSGKTTQMAQYLAEEGFLEKGRLGCTQPRKVAAVSVAKRVAEEVGCRLGAE
VGYTIRFEDMTSPETKIKYMTDGMLLRELLVDPDCSKYSVIMLDEAHERTIATDVLFGLL
KKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPGRTYPVETLYTKEPEPDYLEASL
ITILQIHLMEPAGDILLFLTGQEEIDTACEVLYERVKALGPQVPELLILPVYAALPSEMQ
SRIFEPAPPGARKVVIATNIAETSITIDGIYYVIDPGFAKQNAYDPKLGMDSLIVTPISQ
AQARQRAGRAGRTGPGKCYRLYTEVAYRNEMLSNPIPEIQRTNLASTILTLKAMGINDLI
GFDFMDPPPAATMLTALEQLYALGALDDEGLLTRIGRKMADFPLDPPLSKMLIKSVDYGC
SEEALTIVAMLQAGGQVYYRPKDKQTQADAKKAKFHQPEGDLLTLLAVYNGWKNSKFSNP
WCFENFIQTRAMKTAQDVRKQLIGIMDRYKHDLVSCGTNYNRVRMAICSGFFRNAAKKDP
TEGYKTLVEGTPVSIHPSSALFQRPPEWCVYYELVLTAKEYMHQVTVIEPKWLSEVAPTF
FRIADQNKISKRKASEKIEPLFDRFAADKDDWRLSKQKKAARSSQTFG
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgtccaccgataaagagttatataagctcgaacttctctcccttgtgtcgaaggtttcg
caggagctcttcaaccacactaagcttcaagataaaaagctagccgaatttgtgatagca
ctgcacgaacaaagcaaaacgactgaagcgttccagaagaagctcaatgagatcggcgca
gactttcccgaatggtttatcaaaaatctcgacagactgattgttaccatgcacccaaag
tataaaaggaaagctgccaagatgaaaacctcgggacagtcacgaaagtctggcgatgga
caatctatcatggatgagcagaagcaacttcaggcgagaaagtttccggggttgtccatg
cctgaccaagagtgggggcctgcggagaaatatgtcgatgaaagggctgcaaaagagctg
cacgagacccttccggaatcactttcgaccggtgatactgtggcccagttagagtcgatc
gcgtctcgccgaaatagaccggcggcggaggattacttggatggggagcctactgcgaag
aaaatgcggagtaccattagcagcggtcatgatggttcgtcaggacgagggggtgaatac
gaagctggcggatttagagattcttccagacatgggcgtccgacacttgatgagaggcct
gtcctttacaagatctacaacggcactatcgcgaatatcaccgatttcggagcttttgtg
actttagatggcgtagaaagaagagtcaatggtaatcagaggtcgaatgaaggcttggtc
catgtctcgaatattacaaatggaagagttaactctgcaagggatttccttaaacgaggt
caacgagtcaaagtcaaagttatgaccgtcagtcctaagattggtctaagtatgaaggat
gtcgatcaggacaccggttatgatctttccccacatctcactgtccagactgccgaagag
gccgcgatgcagcagcaaaggatgtcatcttatgcagctagtgggagcaacagcactccc
ctcttggcagttgatgagcggcagcgatcgagtgcgaagagattatcaagtcctgagcgg
ttcgagatcaagcagctcatagccagtggggccgtttctgcagctgattaccctgatctt
gatgaagactttagcaccaacgtcgccaatcatgagattgaagaagacattgacgtcgaa
gtgaatgaagtcgagcctgcattcttatcgggccagaccaaagtcaccttggaactctct
cctgttaaaattatcaaagcaccagacggctcacttaaccgtgctgctttagcaggcgct
tcattagcgaacgaaagacgggacctcaaacgtttagaagcgaatgagcaggccgacgca
gagaccagggagattaaccaaccttggcttgatcccatggcgaaccaaaacgagcgacag
tttgcatcagacatcaaaggcaacctgcttggtcaaaaggccgctcaaacgcctgcctgg
aaagctgcaaataaagttgtgtcgtatggcaaaatcacttctatgagtatacaagaacaa
agacgcagtttgcctatctacaaattacgggaacagttggtcgccgctattcgggacaat
caaattcttgttgtggtcggagacactgggtctgggaagaccactcagatggcccaatac
cttgctgaagaaggattcctcgagaaagggcgtttgggatgcactcaaccgcgaaaggtt
gccgctgtttctgttgctaagcgtgttgcagaggaagtgggttgtcgactcggggctgaa
gtcggctacactatccgttttgaggatatgacaagtcctgagaccaagatcaagtacatg
accgatggtatgctgcttcgtgaattgctggttgatccggattgttcgaaatactcggtg
attatgcttgatgaagcccacgagcgcacaatcgcaactgacgtcctctttggtctcctg
aaaaaggcttgcaagcgacgcccagatcttaaactgatatgtacctctgccacactggat
gctgccaagtttgcaacgtacttctggggttgccctatctttactattcctggccgaaca
taccctgtcgagacactttatacaaaggaacctgagcctgactacctcgaggcttctctc
atcaccatccttcaaatccatctcatggaaccagcaggcgatattcttcttttccttaca
ggtcaagaggagatcgatacagcctgtgaggtgctatatgagcgagttaaggcattgggt
cctcaagtcccagagcttctcattctaccagtttatgctgcacttccctctgagatgcag
tcacgcatttttgagccagctccaccaggtgcacgtaaggtagtcatcgcaaccaacatt
gcagagaccagtatcaccattgatggcatatattatgtcattgatcctggatttgcaaag
cagaatgcttatgacccaaagcttggtatggattctttgatagtcactccgatctcccaa
gcgcaagcacgtcaaagagctgggcgtgctggccgcacaggccctggcaagtgttatcgc
ctctacacagaggtcgcctaccgcaatgagatgttatccaaccctatccctgagatccaa
cgcaccaatcttgcatctactatccttactctgaaagcaatgggaatcaatgaccttatt
ggtttcgattttatggatcctcctccagcagcaaccatgttgacagctttagagcaactt
tatgctcttggtgccttggatgatgaaggattgttgaccaggattggtcgaaaaatggca
gatttccctctagaccctcccttatccaagatgcttatcaaatctgttgattatggatgc
tctgaagaagccttaacaattgtggctatgttgcaagctggggggcaagtgtactaccga
cccaaggacaaacagactcaagcagatgccaagaaagcgaaatttcatcaaccagaaggt
gaccttctgacattacttgctgtctataatggatggaagaactcgaaattcagtaatcca
tggtgctttgagaattttattcaaacacgagccatgaaaacagcacaagatgtaaggaaa
cagttgattggaattatggacagatataaacatgatcttgtgtcatgtggtactaattac
aaccgagtacggatggccatttgctctggattctttagaaatgcggccaagaaggatcct
actgaaggttacaaaacacttgttgaaggcacccctgtcagcatccacccctcgagtgcc
ttgtttcagcgacctcctgaatggtgtgtgtattatgaactggtcctcactgcaaaggag
tacatgcaccaggtcacggttattgaaccgaaatggctttctgaagtggcacccaccttt
ttccgtattgcagatcaaaacaagattagcaagcgtaaggcatctgagaagattgaacct
ctgtttgatcgatttgctgcagataaagatgactggcgtctcagcaaacagaagaaggca
gctcgctcttcacagacttttggatga

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