Cryptococcus gattii: CGB_D5400W
Help
Entry
CGB_D5400W CDS
T02232
Name
(RefSeq) WD-repeat protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cgi
Cryptococcus gattii
Pathway
cgi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CGB_D5400W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_D5400W
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CGB_D5400W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Utp12
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_DCAF4
eIF2A
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_WDR35_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
10191337
NCBI-ProteinID:
XP_003193641
UniProt:
E6R455
LinkDB
All DBs
Position
D:join(1219413..1219527,1219578..1219678,1219732..1219852,1219897..1220026,1220077..1220276,1220327..1220505,1220558..1220744,1220796..1221298,1221350..1221836,1221882..1222024,1222080..1222296,1222343..1222659)
Genome browser
AA seq
899 aa
AA seq
DB search
MFVHTPSGALATPTVNITTSVGRSWLMWDASRMTLVFAGADTGNQINGLTMTGTDIYASS
GSRVIKYHRGKEVASFLSPDGSTLGQMLIFGDDFLVLKKDGTGMFVFDLATRHLRNQIAF
HSSFTASSLMHPATYLNKVLVGSRQGELQLWNVRTCALVHSFPHPTPSNPSPITTIVQTP
AVDVVGIGHLDGSIRIQDIKHGDLVMQMKIEDGAVSSMSFRMDGSSILATASSTGSISIW
DLNKGGRILHTLRGAHDQSISGLQWVSGQPLLISSSFDNSVKQWLCDSPTGMPRLLKLRG
GHHAPPTCVRYYGEDGKQILTAGKDRALRYTSVVRDSRSFELSQGSLVKKAIGLGVTVDH
LKFPPITAISSSSMRSKDWEDVLTAHSEDAVARTWRVQEKRLGPWTFELEDGYAQSVCVT
ACGNFGFAGSSTGEIRMWNMQSGKERKSFALRGAAPGNSKPKIISQSKGAVKAKVEKAER
TKGNKSVQAITGLVTDALNTMVVASTLEGKLHFFDFHSTKKLDEIQLESSITAISLNRDS
GLLAVICDDLAIRLVDIESRRVVRELRGFKGRILDVAFTPDSRWVIATSLDSIIRTYDIP
TGKLIDAFKTSSIATSVTFSPTGDFLATAHVDSVGVYLWANRAQFTDVALRHLEEDDDIV
EVGLPTVQGLDADADIEGIEDVGAPEFTDIYTTPDQIDESLVTLSLIPRSRWQMLLNLET
IKQRNKPKEAPKAPEKAPFFLPTISGLETQFDLSAVDKDQAEEELRKGKRLELDGSWLES
EFTRRLSGEDETGSYNAFFEYMKALPPSTLDLEIRSLISLAHLSSFINALTQRLKSHRDY
EAIQAIMSVFLRVHGDMLIANAELKEGLEALKVEQERESKRLRELVGYALGTLGFLRGA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacactccaagtggagcgctcgctacacccactgtgaacataacaacgtca
gtggggagaagctggctgatgtgggatgcgtcaaggatgactttagttttcgctggggct
gatactggtaaccaaataaatggcttgacgatgactgggacagacatatatgcctcctct
ggctccagagtcatcaagtaccatcgaggcaaggaggtggcttcttttctctctccagat
gggtcgactctgggacagatgttaatttttggtgatgatttcctggtcctcaaaaaagat
ggcacaggaatgttcgtgtttgatttggctactcggcatctgaggaatcagattgctttt
catagttcattcacggcatcttcgttaatgcatcccgccacatatctgaacaaagtcctg
gtaggcagtagacagggtgaattgcagttgtggaatgtccggacatgtgcccttgtccac
tcttttcctcaccccaccccatccaatccgtctcctataactaccattgtacaaacgcct
gctgttgatgttgttggtattggtcatctcgatggatccatccgaatccaagatatcaaa
catggcgatttagtcatgcaaatgaagattgaggatggtgcagtgtcctcaatgtcattt
cgaatggacgggtcgtcaatcttggccaccgcatcttcaactggttcaatatctatttgg
gatctcaataagggtggaaggatattgcacacccttcggggtgcgcatgatcagagtatc
agcggccttcaatgggtttctggacagcctttgctgatatcttccagtttcgacaacagt
gtcaagcaatggctctgtgattctccgactgggatgccaagactactcaagctgcgtggt
ggtcatcacgcccctccaacttgtgttaggtattacggggaagacggaaaacagattttg
accgctggtaaagaccgcgccctcaggtacaccagtgtcgtccgggactctcgaagtttc
gagctctcccaaggttcattggtgaaaaaggctatcggccttggagtaaccgttgaccac
ctcaaattccccccaatcactgccatctcgagctcgtccatgcgctccaaagattgggag
gacgttctcaccgctcattctgaggatgccgttgctcgcacctggcgtgtccaagaaaaa
cgtctgggcccatggacttttgagcttgaagatggttatgctcagtccgtatgcgtaacc
gcttgtggtaattttggctttgcaggatcttccactggagaaattaggatgtggaacatg
cagtctgggaaagagcgcaaatcttttgctcttaggggcgccgcgccaggtaactcgaaa
cctaaaattatctcacaaagcaagggcgctgtgaaggcaaaagtagagaaggctgaaaga
actaagggcaataagtctgtgcaggctatcacaggccttgtaacagatgcgttgaacacc
atggttgttgccagtacacttgaagggaaacttcacttctttgactttcatagcactaaa
aaactagacgaaatacaattagagtcttctataacagccatctccctcaatcgcgacagc
gggctacttgcggtgatctgcgatgatctggctatccgtctcgttgacatcgaatcccgc
agagtcgttcgagaactaagaggtttcaaaggtcgtatccttgacgtcgcctttacaccc
gattcccgctgggtgattgctacttctcttgattctatcattcgtacctacgatattcct
actggtaaacttattgacgcgttcaaaacatcttccatcgccaccagcgtgacattttct
cctacgggggactttctggctacagcccatgtcgacagtgtgggagtctatctttgggca
aacagggcccagtttacagatgtggcattgcggcatcttgaggaggatgatgacattgtc
gaggtgggattgcctacggttcagggattggatgcagacgccgatatcgagggcatcgag
gatgtcggtgcaccggagtttacagacatctataccactcctgatcaaattgacgaatca
ttggtcacgctctctcttatacccaggtcacgatggcaaatgctactcaatctcgagacc
ataaaacaacggaacaaacctaaagaggctccaaaagcgcccgaaaaggctcccttcttc
ttgcccaccataagcggacttgagactcagttcgatttgtccgccgttgataaggaccag
gcagaggaagaactccgtaaggggaagagactggaactggatggtagctggttagaaagc
gaattcacaaggagattaagcggggaggatgagactggaagctacaacgcgttttttgag
tacatgaaggccctgcctccctccactctcgaccttgaaatccgatcgctcatctctctc
gcccacctttcctcatttatcaatgcgctcacccaacgactcaaatcacaccgagattat
gaagccatccaggccattatgtctgtctttttgagagtgcacggcgacatgttgatcgcc
aatgcggagttaaaggaaggacttgaagcgctgaaagtggagcaagaaagggaaagtaag
aggctgagagaacttgtggggtatgctttagggaccttgggtttccttcgtggcgcttga
DBGET
integrated database retrieval system
