Cryptococcus gattii: CGB_D5700C
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Entry
CGB_D5700C CDS
T02232
Name
(RefSeq) DNA-directed RNA polymerase I 190 kDa polypeptide
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGB_D5700C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgi03021
]
CGB_D5700C
Enzymes [BR:
cgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGB_D5700C
Transcription machinery [BR:
cgi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CGB_D5700C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
10191353
NCBI-ProteinID:
XP_003193673
UniProt:
E6R485
LinkDB
All DBs
Position
D:complement(join(1294707..1294928,1294982..1295203,1295264..1295392,1295444..1296243,1296300..1298033,1298085..1298137,1298185..1298654,1298704..1299541,1299591..1299958,1300014..1300173,1300225..1300409))
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AA seq
1726 aa
AA seq
DB search
MDISHSIHSEVSSLSFSFLSADDIKAISVKKVDNPILLDNLNLPTRGGLYDPKLGPMGSR
DLCETCHLSYFACPGHFGHIELPTPVYHPLFMNQCYHLLRGVCLYCHHFKMPEIVAASYV
ARLRLLDAGLLTESHEVAALFDNAIGKSSRHKDNEDEDAEGDVDMDAPAPQTIESAAEFM
VRIGAYVQHHLKLARQNAGGRDNKVEDGYKDGLVFEERKKLLHEFGKKIWNRCTRCTAYG
NTFRKEKAIKIIEYDLTPKQKLANKLSNLRRPDVLAASGKYSSKQRRSDGDIDEGIEMDS
DKSSVSEGEGESLDEEEEEEQEVGQMVAKTASGQIKGTRGRHERVMSPAEVRAHLRLLFN
KEPEICRLIYGRHGNPAALSSVAPPPLADMFFMEVVPVTPTRFRPAARMGDELFENSQNS
LLTAVLTTCQRIQKLNQDLINQAKAERGELVLDAVAKAQGSRTFELLLEALIKLQHDVNS
FVDSTKNPAVMRQGKLPPPGVKQLLEKKEGLFRKHMMGKRVNYAARSVISPDINIETNEI
GIPPVFAKKLTYPEPVTQQNVAELRQLVINGPKIHPGAALVQNEDGTQISLDKLTLDQRI
SLASQLLTPQGSEDNIGAATVGPAAKNKKVYRHIRDGDIVILNRQPTLHKPSMMCHRVKV
LLGEKTIRMHYANCNSYNADFDGDEMNIHFPQNEVARAEAQMIANTDNQYLVPTSGGPLR
GLIQDHVVAGVWMCNKSSFFTREQYFQLIYGALRTENNYTGRSRIIILPPAIFKPKPLWT
GKQIMSTILANLTPFNAKGLNLTSRNKVQNKLWRRDDSSDPAMSEENVVFLDGHLVCGVL
DKSQYGASGYGLVHSVHELYGPYVANRLLGVLSRLLTKYLQHDAFSCRMDDLILTAEGEK
IRKDILDKASGDGAVAAMKYVGLPEGSTIEDPDTAKNLAIRLEEILRDDHLMAGLDAVMQ
SAFNKTTSKINNDVLPDHLVRPFPDNNMQMMTISGAKGSKVNASQISTLLGQQALEGRRV
PTMVSGKTLPSFKAFDTSARAGGYVANRFLTGIRPQEYYFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGVKVHYDHTVRDSDSSVLQFLYGEDSLDVTKQTHLNKFDFAAANHLSLL
NKVRPGDIAGKVSDEALSHMKKALKKPHKHVPALSEYSPSRYIGSMSEAYAKKLNNYIED
NKLGYIAKKGENKASPYTSERIPEKEFLGLARARYMRSLVEPGEAVGLLASQGVGEPSTQ
MTLNTFHLAGHGAANVTLGIPRLREIVMTASSKPTTPTMKLPLREHISDKDIETFVKQVS
RLTLSEVVERVTVTERLSSKSSETDSRQRKYTVLLEFYPPEEYGTEYEITPEQLHESLAW
NFAPRLKKEIQNEIRRVAKTKEQEAQVGKGRKVRVGGEEVDEEEVDRETDVRRRGRDDEL
DNDDEDSYQLKRAAQAKQHEYEADSDADSGVADLEDFVEKELEEDDEEAVEDDATEKAKK
DQKADDWAELFKLASKYATTFSFDGHSGKSAQFDLEFPASAPKLLLVDIIERTCRAAVVH
EIENIGRCMKIFSDKGEFTRSLITEGSNLRGMWALADELVDLDRLSSNDIYAILTTFGVE
AARRAIIDEVSSVFGAYGIAVDYRHLTIIADYMTHAGGFRPFNRTGISAKSSPLLKASFE
TTVAFLSEATLHGDFDDLTSPAAKIVMGKPSASGTGAFDIRAPTRL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggacatctctcactcaatccactccgaagtatcctccctatctttctccttcctctcc
gcagatgacatcaaagctatctcagtcaagaaggttgacaaccctatcttgctcgacaac
ctcaatctccctaccagaggtggtttgtatgaccccaaacttggccctatgggctctagg
gacctgtgtgaaacatgccacctttcatactttgcctgtcccggacattttggtcacatt
gagctccctacgcctgtctatcacccactattcatgaaccagtgctatcacttgttgcgt
ggcgtgtgtctctactgccatcattttaaaatgcccgagattgtcgccgcttcctacgtc
gcccgtctccgtctcttggatgcaggtctcctcacggagtcacatgaagtagctgctctt
ttcgacaatgctattggaaaatcctcgcgccacaaggataatgaggacgaggatgcagaa
ggtgacgtcgatatggatgcccctgctcctcagaccattgaatccgcagccgagttcatg
gttagaattggggcttacgttcaacatcacctcaaactggcaagacaaaatgcaggagga
agagacaacaaagtggaggacggttacaaagacggtcttgtctttgaagaacggaaaaag
ttgctgcacgaattcgggaaaaagatctggaacaggtgtactcgatgtaccgcttacggt
aacactttccgcaaggaaaaggccattaagatcattgagtatgatctcactccaaagcag
aaactcgccaataaactgtcaaatcttcggcgccccgatgtcttagccgcttctggcaaa
tactcatccaagcaacgccgttcagatggcgatatcgacgagggtatcgaaatggacagt
gacaaatccagcgtgtctgaaggagaaggcgagtccctggatgaagaggaagaagaggag
caagaggttggacaaatggtggccaaaactgcaagtggtcaaatcaagggtacccgaggt
cgtcacgagcgtgtcatgtctcctgcggaagtccgcgctcaccttcgtcttctttttaat
aaggagcccgaaatttgtcgcttgatctatggcagacatggcaacccggcagccctttcc
tccgttgcccctccccctctcgcagacatgtttttcatggaagtggtccctgtcactcct
actcgtttccgacctgctgccagaatgggcgacgaacttttcgagaacagccagaactct
cttctcacagccgtcttgactacctgtcaacgaattcaaaaactcaatcaagatttaatc
aatcaagctaaggcggagcgaggcgagcttgttcttgatgcggtagctaaagcccaaggc
agtcgaacgtttgagctcttgcttgaggctttgatcaagcttcagcacgatgtaaacagt
tttgttgacagcactaaaaacccagcagtcatgagacagggcaagttgccaccacctggt
gttaaacagcttttggagaagaaggaaggtttgttcaggaaacatatgatgggcaagcga
gtgaactatgccgcccgatctgtcatatctcccgacatcaatattgagaccaacgaaatc
ggtattcctcctgtcttcgccaagaagctcacgtatcctgaacctgttactcaacagaat
gtcgctgagctccgtcaactcgtaatcaacggtccgaaaattcatcccggtgccgcactt
gttcagaacgaggacggtacccaaatttctctggataagttgactctcgaccaaagaatt
tctctcgctagccagctgttgacccctcaagggagcgaagacaatattggagccgccact
gttggcccagctgccaagaacaagaaggtgtataggcatatcagggacggcgacatcgtc
attctcaaccgacaaccaactctgcacaagccttcaatgatgtgccatcgcgtcaaagtc
ctgttgggagagaaaacgatcagaatgcactatgccaactgtaactcctacaatgcggat
tttgatggtgacgaaatgaacattcacttccctcaaaacgaagtcgctagagctgaggct
cagatgatcgccaataccgataaccaatatttggttcccacatctggtggtcctcttcga
ggtctgattcaagaccacgtcgtggctggtgtatggatgtgcaacaaatcttccttcttc
actcgagagcaatatttccagctcatttatggtgcccttcgtaccgaaaacaactatact
ggtcgatctcgcataatcatccttccccccgccatcttcaagcccaagcccctttggaca
ggtaaacagatcatgtccactattctggctaatcttactcctttcaacgctaagggcctt
aaccttacttcaaggaacaaggtacagaacaagctttggagaagagacgattcttctgat
cctgcgatgagcgaggagaatgtcgttttccttgacggtcatctggtttgtggtgttctc
gacaaatcccaatacggtgcttccgggtatggtcttgtgcattctgtgcatgagctttat
ggcccatatgttgccaacaggctactgggcgttttgtctcgtcttttgacaaaatatctt
caacatgacgctttttcgtgtaggatggatgacttgattctcactgctgaaggcgagaaa
atccgaaaggatattcttgacaaggcatccggtgatggcgccgtagcggccatgaagtac
gttggcttgcctgaaggctcgacgatcgaagacccagacaccgctaagaaccttgccatt
cgattggaagaaatcttacgagatgatcatcttatggcaggtcttgatgccgtcatgcaa
tccgctttcaacaagaccacctccaagatcaacaacgacgtcttacccgatcaccttgtg
cgacctttccccgacaacaacatgcaaatgatgacaatatccggtgctaaaggttccaag
gtcaacgcctctcaaatctctacattgttgggtcaacaagctcttgagggtcgtcgtgtg
cctacaatggtttccggtaagacccttccgtccttcaaggcctttgataccagcgctcgg
gcaggtggatatgttgccaaccgtttcttaactggtatccgccctcaggagtattacttc
cattgtatggctggtcgagaaggtcttatcgacacggctgtcaagactagtcgatctggt
tatcttcaacgatgtttgattaagcatctcgaaggtgtaaaggttcactacgatcacact
gtacgagacagcgattcttctgtgttacagttcctctatggtgaagattcacttgatgtg
actaagcagacccatctgaacaagttcgatttcgcggctgccaaccatctttctctactc
aacaaggttcgaccgggagacattgcagggaaggtatctgacgaggccctctctcacatg
aagaaagccctgaagaagccccacaagcatgtgcctgctctttcggagtactcgccgtcc
cgatatatcggtagtatgtcagaggcttatgccaaaaagctgaataactacattgaagac
aacaagcttggatacatagcgaagaagggagagaacaaagccagtccgtatacgagcgaa
agaatcccagagaaagagttcttgggtctggccagagctcgatatatgaggagcttggtg
gaacctggagaagctgtcggtttgttagctagtcaaggtgtcggtgaaccatccacacaa
atgacattaaacactttccatttagctggtcacggcgctgctaacgtcaccctcggtatt
cctcgtttgcgagaaattgtcatgactgcctcctccaagcctaccactcctaccatgaaa
cttcctttacgagaacatatttccgacaaggacatcgagacttttgttaagcaagtctcg
cgacttactctctccgaagttgtggagcgggttaccgttaccgaacgcctatcgtccaag
tcttccgaaaccgactctcgtcagcgtaaatacactgttctacttgagttctaccctcct
gaagagtacggtacagaatacgagattacccccgaacaacttcacgagagtttggcttgg
aattttgctcctagactcaagaaggaaatccagaacgagattagaagggtagccaagaca
aaagaacaagaagcccaggtgggaaaaggtcgcaaagtccgagttggtggtgaagaagtg
gacgaggaggaagttgatagagaaactgatgttaggagaagaggtcgggacgacgagttg
gacaacgatgacgaggactcctatcaactcaaacgtgcggctcaagccaagcaacacgag
tatgaggcggactccgatgccgattctggcgttgcagacctcgaagattttgtggagaag
gagctcgaggaggatgatgaggaagctgtggaagacgacgccactgagaaggcaaagaag
gatcaaaaggcggatgactgggccgaattgttcaaacttgctagcaagtacgcgacaaca
ttcagctttgacggtcacagtggaaaatcggcccaatttgatcttgagttcccggcgagt
gcgcccaagttgttgttggtagatatcattgagagaacttgtcgagctgctgttgttcac
gaaatcgagaatattggcaggtgtatgaagattttctccgataaaggagagtttacgcga
tcactcatcactgaaggctctaatctcagaggcatgtgggccctcgctgatgagcttgtc
gatcttgacaggctctcctccaacgatatctacgcaattcttacaactttcggtgtcgaa
gctgcccgccgagccatcattgatgaagtttcgagcgttttcggagcttacggtattgct
gttgactatagacatctaaccattattgccgattacatgactcatgccggtggcttcagg
ccattcaaccgtactggtatctcagccaagtcttcaccgctactcaaagcgtcttttgaa
acaaccgttgccttcctgtctgaggccacccttcacggtgactttgatgacttgacgagc
cccgcagctaagatcgtgatgggtaaacctagtgcgagcggtactggcgcttttgacata
cgtgctcctacaagattatag
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integrated database retrieval system
