Entry |
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Name |
(RefSeq) hypothetical protein
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KO |
K10838 | xeroderma pigmentosum group C-complementing protein |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cgi00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGB_D7540C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cgi03400]
CGB_D7540C
DNA repair and recombination proteins [BR:cgi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CGB_D7540C
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
D:complement(join(1696297..1697103,1697157..1697212,1697266..1697347,1697398..1697704,1697755..1697846,1697895..1698037,1698090..1698257,1698310..1699108,1699153..1699508,1699566..1699710))
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AA seq |
984 aa
MSASRPKSSRVIQKPRGISALAARIPSSSKQQANVSGKRKTPTPATHKGTRPASPISVAS
TVLTVSDNDEDDEDEDEFEEVPIPISSGEVQEGDEDEDEEDDAGVIHLEIGGETAEEKAK
RMLLAKRKKPLTARDRALRLEVHKVHVVALLASASIRNKWCNNPLLKARLLSLLPHPLQA
AFNIPPSRFPDRAQRSRLFFEALQSLVTWWSQTFFDVSDYAMGLRTRPWDEVQGIIESIS
KAHTPFSRSSSPHGDGKMSNKAVNKGKGKAAASEELSEQLAFGSGAERLRSVNSLMKKAL
QQEGSRDVSAQLFVALARACGLGVRLITSLQAVPWRAEKVATKKKGVGAGRGGRTLASRQ
GLGDGDEDDDEDEMEEVPIPDDQGKSVGGAKNNTRGVGNRRLQDPADLYRLRKYKRPPRK
LGSPAKSKPRASQSLADQPPVFWAEVFNRSDQRWIPVDTVRGIIRKKSGFEPLTDSGPVR
MLYVVAFEEDGYARDVTLRYTKNFYAKTSKLRVPAKPNEPQWWSDIVMGFLQRPQHLNRD
DMEDAELEMSQMTEGMPMHMSGFKDHPIYVLERHLKRDQVLNTAKPVGRFKGEAVYRRSS
VQNCKTAENWMRSGRKIKEGQEPLKWVKQRAVTLQKRRAQELAKQEGEEVTQGLYAEWQT
EIYRPPPIKDGIIPRNSFGNIDLYAPTMLPLGAVHLPYKGIAKVAKSLGVSYAEACTGFE
FKKQRAVPVIKGIVVAAEKEQEILEAYEESTIAAEERERMKREDRALKRWAKLVNGLRLR
LRLQQEYGSKDKVNGSSNTGDEGEIQVNPPGKTAAEILAAAQRKSTRDWEERVRREDISM
DEEDDMTPAMAIEREPHQIPLNDSSPPNNVVSEISNIASTSETPRIMLRFKNTSSPQSAA
QAASESRNRRTFSRKRKTMISETIEAVDNGQFDDPQTTKGSIKRGKEIALPEPVASAANG
RTLRSTRARTREQMKANQAKVEEN |
NT seq |
2955 nt +upstreamnt +downstreamnt
atgagcgcttccagacccaaatcttcaagggtcattcaaaaaccacgaggaatatcagct
cttgccgctaggatcccctcctcctcaaaacaacaggccaatgtcagtggcaaacgtaaa
actccgacccctgcgactcacaaaggtacccgacctgcctccccaatatcagttgcctcg
acggttctaaccgtgtcagataatgatgaagatgacgaagatgaagatgaattcgaagaa
gttcctatacctatttcctctggcgaagtccaagaaggcgatgaagatgaagatgaggaa
gatgacgccggtgtaattcatctggagattggtggagaaaccgcggaagagaaggccaag
cgcatgcttttagctaagagaaaaaagccattgacagcaagagatagagctctaaggttg
gaagtccacaaagtgcatgttgtggctctattggctagtgctagcatacgaaacaagtgg
tgtaataaccctctcctaaaagcccgtttgctctctcttctgccgcatccgctacaagcg
gctttcaacattcctccttcccgctttcctgatcgagcacaacgttctcgcttatttttc
gaagctctacagtccctcgtcacgtggtggtcgcagacattttttgatgtgtcggactat
gccatgggcttgcgaactcgtccttgggacgaagtccagggcattatcgagtcaatatct
aaagcacataccccctttagtcgatcgtcttcgccccatggtgacggcaaaatgagcaat
aaagcggtaaacaagggtaaaggcaaagctgctgcaagtgaagaactgtcagagcaactt
gccttcggatccggtgccgaacgtcttcggtcggtcaacagtcttatgaaaaaagcgttg
caacaggaaggctctcgggatgtttcagctcaactgtttgtcgctcttgctcgggcatgt
gggctaggtgtcagacttatcacctcacttcaagcagtaccgtggagagcagaaaaggtt
gcaaccaagaaaaagggtgtaggagccggtagaggaggcaggacgttggctagcagacag
ggtttaggagacggagacgaggatgacgacgaagatgaaatggaagaagttcccatacca
gacgaccaaggaaaatccgtaggaggggctaagaataatacacgaggagttggcaatagg
cgattgcaagatccagcagacctctatagattacgaaaatacaagcgtccgccacggaag
cttgggtcaccagccaaatccaagccgagggcaagtcagagtcttgccgaccagccgcct
gtcttttgggcagaagtatttaatagatcagaccagcgatggatacctgttgacactgtg
aggggcatcatccgaaagaaaagtggttttgagcccctcacggacagcggaccagttaga
atgctgtatgttgttgcctttgaagaagacggttacgctcgagatgtgacccttcgatat
accaaaaacttctatgctaaaaccagtaaattgcgggtgcctgcgaagccaaatgagcca
caatggtggagtgatatcgttatgggtttcctacagaggccgcagcatttaaaccgagat
gatatggaagatgcagagctggaaatgagtcagatgacagagggtatgccaatgcatatg
agtggcttcaaagatcacccaatttatgttcttgaacgccacctcaagcgggatcaagtg
cttaacaccgcgaagcccgtaggtcgtttcaaaggtgaagcagtttatcgtcgttcctcc
gttcagaactgtaaaactgctgaaaattggatgcgctctgggcgcaaaataaaagaaggg
caagagcctctaaaatgggttaaacagagagccgtgacgttacaaaaacgaagagcgcaa
gagctggcaaagcaggaaggcgaggaagtaactcagggactgtatgcagagtggcagacg
gagatctacaggcctccacccatcaaagatggcataataccaaggaactcttttggcaat
attgatctctatgcaccaactatgctgcccctcggtgcagtccatctaccgtacaagggc
attgctaaagttgccaaaagccttggagtaagttatgcagaggcttgcactggttttgaa
ttcaaaaaacaacgagccgtgccagtcattaaaggcatagtagtagcagctgaaaaggaa
caagaaatccttgaagcctacgaagaatctaccattgctgctgaagagcgcgaacgcatg
aagcgggaagatcgtgctttgaaacgttgggctaagcttgtaaacggtctgcggcttcgc
ctacgtcttcaacaagagtatggctcgaaggacaaggtgaatgggtcttcaaataccggg
gatgagggcgaaatacaagtgaatcccccggggaagactgcagcggaaattttggcagct
gcgcagcggaagagcaccagagattgggaagagagagttagaagagaggatatcagcatg
gacgaggaggatgatatgacacctgcgatggccattgaacgggagccacatcagattcca
ctgaacgattcctcccctcccaataatgtcgtttcggaaatcagcaatatcgcttctacg
tcggaaacaccgaggatcatgcttcgatttaaaaatacctcttctccacaatcagcagct
caagccgcctctgaaagtcggaataggcgcactttttctcggaagaggaaaacaatgatt
tcggagacgattgaagctgttgacaatggacagtttgacgatccacagacaacaaaaggg
agcataaaaaggggcaaagagatagcattaccagagcctgtagctagtgcggccaatggg
cggacactgaggagcacaagagcaaggacaagagaacagatgaaggccaaccaggcaaaa
gtagaagaaaattag |