Cryptococcus gattii: CGB_E0300W
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Entry
CGB_E0300W CDS
T02232
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cgi
Cryptococcus gattii
Pathway
cgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CGB_E0300W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_E0300W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CGB_E0300W
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
10189969
NCBI-ProteinID:
XP_003194056
UniProt:
E6R6D2
LinkDB
All DBs
Position
E:join(74077..74213,74327..74506,74600..74709,74779..75618,75685..76682)
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AA seq
754 aa
AA seq
DB search
MDIDEDDAFLYGDEPQQQESTAQSEAQEQAQAQAAKESAISASMAASLAAYGIDASAAVV
EPLPENPEDGGVEEEDEGDEDEDEESDEDDVKLVFTGGSSRQLDLRKPQQAPAVVGIGKW
AHASTGSQAPATPSTPQAGQVTATQNVPGQTTEYTPAPRPSASATPQPQPVNALANPPIA
PTSQAPNLQPQPSTITNAVAANGPPTNPNLPPSHLPPVTNPAANPRFDPSNPSGVIPSSG
QSVYDIDLSLFEGSGQPWRQPGAVVSDWFNFGFDEHTFPKWVRYRTEMGEGVKSLAAGGG
LGAGAGVGGDTMNQMGVNGMNGMNPQVQAQAQAAAAAAAAMQGMGGMGGMMPNQMQAQMQ
QMQQMQQMQQMQQMMAMGGMPGMQGMDMGMMGQMGQMGGMGGMGGMGGMGQMGQMGQMGA
RQGVRPNNPTAGNAIANNANATANSNSGGQEVKQEEGEHVEQPSAGATPTGRAPPPPGRN
MNVGTTTSSGPAAVTPNAGAVNPAAAAAAANVAGTANPSATTANAATANANTAAHVPTGP
RATTAVPLGPRAGAGMVPTGPKGRFRDKDRVVDVGSASGGTLDYGGGDDVVPPASSASAS
ASNANANAGSGSGMRSTSKRDRERDRERERERDKESHSRDSRGRDRGRDKDRERERERER
GEYDEEGYTSDEKDRERRRRRERSERSDKDKERSDKRKREGGSVSASASLGPGGWEEGEE
EEEYVVPRERERERTRRKRSESEDDEGHRRSKRR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatgaagatgacgctttcctctatggggatgaacctcaacagcaagaatct
actgcccaatctgaggcgcaggagcaagcacaagcacaagcagcaaaggagagtgcgatc
agcgcatcgatggcagcgtccctagcggcatacggtatagacgcctctgcagccgttgtc
gaacctctccccgaaaacccggaagacggtggtgtcgaagaagaagatgaaggagatgaa
gatgaggatgaggaatcagacgaggatgatgtaaagcttgtatttactggagggagctcg
agacaattggatttgaggaaaccgcaacaggctccagcagttgttgggattggaaaatgg
gcacatgcgagtacaggttcgcaagcgcctgcgacgcctagtacgcctcaagctggtcag
gttaccgcaacccaaaacgtccctggacaaaccaccgaatacacacccgcacctcgtcct
tctgcgtctgccacccctcaaccccaacctgtcaacgcgctggccaacccgcccattgcg
cccacctctcaagcacccaatcttcaaccgcaaccttcgactatcaccaacgccgtcgcc
gccaacggccccccaacaaaccccaatctccctccctcccacttacctcccgtgaccaac
cctgccgccaacccgcgattcgacccgtccaatccttccggcgtcatcccttcctctggc
cagtcagtgtacgatattgatctttccttattcgaaggttccggccaaccgtggcgccag
cccggggcggtagtgagtgattggtttaatttcgggtttgatgagcatactttcccgaaa
tgggtgaggtatcgaaccgagatgggggagggtgtcaagtctcttgctgctggtggtggt
cttggtgcgggagccggggtgggcggtgatacgatgaaccaaatgggtgtgaacgggatg
aatgggatgaacccgcaagtccaagctcaagcccaagcagcagccgcggcagcagcagcg
atgcaaggtatgggcggtatgggtggcatgatgccgaaccagatgcaagcgcagatgcag
cagatgcaacaaatgcaacaaatgcagcagatgcagcagatgatggcgatggggggtatg
ccggggatgcaggggatggatatggggatgatgggccagatgggacagatgggagggatg
ggaggaatgggtggaatgggcgggatggggcagatggggcaaatgggacagatgggtgca
agacaaggtgtccgacccaacaaccctaccgccggcaacgccattgcaaacaacgccaac
gccactgcaaactcaaactctggaggacaagaagtaaaacaagaagaaggcgaacacgtc
gaacaaccatctgccggtgccacaccaacgggtagggcaccaccgcctcccgggaggaat
atgaatgttggaaccaccacttcttccggtcccgcggctgttactcccaacgccggggcc
gtgaacccggctgctgctgcggctgccgcgaatgtagctggcactgccaacccctccgcc
accactgccaacgctgccaccgccaacgccaatactgcggcccacgtgccaaccggtcca
cgcgcaacaacagccgtccccctcggcccccgcgccggagcggggatggtgcccacaggc
ccgaaaggaaggtttagagataaagatcgggtggttgatgtaggttctgccagtgggggg
acgttggattatggtggtggggatgatgtagtgccgcctgcttcttctgcttctgcctct
gcttccaatgcgaatgcgaatgcggggtcgggttcgggtatgaggagcacgagtaaacgt
gatcgggaaagagatcgggagagggaaagggaaagggataaggagagtcacagcagagat
agtagagggagagatcgagggagagataaggatagggagagggagagggagagggagagg
ggagaatatgatgaagaggggtatacttccgacgagaaggatagagagagaaggcgaagg
agggagaggagtgaacgtagcgacaaggacaaggagcgtagtgataagaggaaacgggaa
ggggggagtgttagtgcgagcgcgagtttgggtcccgggggatgggaggaaggtgaggag
gaggaagagtatgtagtaccacgggagagggagagggagaggacgaggaggaagaggtcg
gagagtgaggatgatgagggacatagaaggagtaagaggagataa
DBGET
integrated database retrieval system
