Cryptococcus gattii: CGB_E1530C
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Entry
CGB_E1530C CDS
T02232
Name
(RefSeq) spliceosome complex protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cgi
Cryptococcus gattii
Pathway
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_E1530C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_E1530C
03041 Spliceosome [BR:
cgi03041
]
CGB_E1530C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CGB_E1530C
Spliceosome [BR:
cgi03041
]
Complex B
Other components
Prp19-related factors
CGB_E1530C
Complex C
CGB_E1530C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_19
TPR_2
TPR_12
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
10190238
NCBI-ProteinID:
XP_003194160
UniProt:
E6R6M8
LinkDB
All DBs
Position
E:complement(join(334956..335311,335370..336087,336134..336212,336261..337414,337467..338255))
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AA seq
1031 aa
AA seq
DB search
MASTSLVDTLTSYFPLTLPIPTPITHPHLIPPADLPVEEDLLHNPENLRSWLSYIHNVKE
KIAANEPAKSGVISPEEEILGPLASKNARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTR
QSYVLGELTNDAKEARSQQAKRGAAYKTNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLI
AAGERMIMCLPNLPIPWLLHLGVLLHPKCPSVFKNGSYARRTFDRALRTLPPSLHGRVWG
LYLRWAEVIGGDAGERVWRRYLKVDPSLTERHITYLLEADEPRPLAAAKYLLSIARRAQQ
NLYSSLEGKSPYQLFVDFLELVEKYADQTGMDEEETLELQKTKRAVEEKVDGEQPPVEEQ
EQQSQEEPASVNGRLMRIAGPPVPLEQGKLFKPTNATSAQAPTQLTYDEDTDPSNSRLLD
VEGIVERDGLQVYKDQAGRLWTGLATYWIKKGEFERASATFEKGLAAVVTIRDFTQIFDA
YAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRPFLVNDVLLR
RNPNEVVEWEKRIALHGNDDAKVVETYVKALDIINPRKATGPLYPLYVNFAKFYEEGGSK
DDNGEPKNEPDLKQARKIFERAVKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRA
TTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANA
QVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAK
ATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPR
VEPEFWQEWNDFEIDTGSEDTFREMLRIKRAVQASFNTETSFIAAQAAAASKGTEKPTDA
SAQEAQEAADPMAAMERELNAVGADGARKGGAPAFVASTLNKTNANGIDEGGKEAGEVAN
PDAIVMDEDEF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacatccctcgtagacacccttacgtcctacttcccactcacgctccccatc
cccacccccatcacccatccacacctcatccctcccgcagacctccctgtcgaagaagac
ctcctgcacaacccggaaaacctccgttcatggctttcctacatccacaacgttaaggaa
aaaattgctgccaatgagcctgccaagagtggcgtgatttcccccgaggaagagatcctt
gggccattggcgagcaagaatgcgcgagacggattgcagcgattggtatcaatctacgag
cgagccatcgccgttttcccaaccagctacaagctctggaaagcgtattaccttacccgc
caatcctacgtgctaggggaacttaccaatgatgccaaagaagcgcgatctcagcaggcc
aagcgcggtgccgcgtacaagaccaacgttcgagagctcttagacggagccgaagaagcc
cacgagtggacaggtggtcttgaccccgtggtcggttatgccgaatggagaagcttgatt
gcggctggtgaaaggatgatcatgtgtcttcccaacttgccaattccatggcttcttcat
ttgggcgtcttgttgcatcctaaatgtccttctgttttcaagaacggctcgtacgcgagg
aggacatttgatagggcgttgaggacattgcctcccagtctgcacggaagggtctggggc
ctgtatctccgctgggccgaggttattggcggagacgctggtgagagagtctggagaagg
tacctcaaggtcgatccgagcttaacagaacgacacatcacatatctcctcgaagctgat
gagcctcgtcctctcgcggctgccaaatatcttctttccatcgctcgtcgtgcccaacaa
aatctctactcttctctggaaggcaaatctccttaccaactgtttgtcgactttttggag
ctcgtggaaaagtatgccgatcagaccggtatggacgaagaggaaacactcgagttgcaa
aagacaaaacgtgcagtggaggaaaaggttgacggggagcagccgccggttgaagaacag
gagcagcagtctcaggaagagcctgctagcgtcaacggccgtctgatgcgcattgcagga
ccccctgtcccacttgagcaaggaaaactcttcaaacctaccaatgccacatcagcccaa
gctcccactcaattgacctacgatgaagataccgatccatcaaactctcggctacttgat
gtggaaggtatcgtcgagagagatggtctccaggtttataaggaccaagctggtcgattg
tggaccggtttggctacctattggattaagaaaggagaatttgaaagggcctctgcgacg
tttgagaagggtcttgcagctgtggtgactattcgagacttcacccagattttcgacgcc
tacgccgaattttcggagaccatgatctccacactcatggacgctcttgctgacgaggat
aaccttgaagatgaagactttgacgcagaagagactgaacaggagttggatgagcgaatg
aagagtttcgaggagttaatggaccgccgaccattccttgtcaacgatgtgctcctccgt
cgaaacccgaacgaagttgtcgagtgggaaaagcgtatcgcccttcatggcaatgatgac
gccaaagtcgttgaaacgtacgtcaaggcactcgatattatcaacccccgaaaagccacc
ggacctctctaccccttgtatgtcaactttgccaagttctatgaagaaggaggaagcaag
gacgacaatggagagccaaagaatgagcctgatttgaagcaagcgaggaagatctttgag
cgggcggtcaaagtgcctttcaaggcggttgatgaattagcagaggtttggtgcgagtgg
gctgagatggagttgagaaatgagaactacgaggaagcgattcgattgatgcagcgggcg
acaacagtccccaaaaacacgaaaatcaactattacgatgataacatccctccccaatct
cggctattcaagtccctcaaactatggtcctactattctgaccttgaagagtctattggg
accgtcgaatcaaccaaagcagtgtacgacaagattatggagctgaaaatcgccaacgcc
caagtcattgtcaattatgccacgttcttggaagagaacaagtactttgaggaaagtttc
aaggtgtacgagcggggaatcgaattgttccatttccccatcgctttcgagatctggaat
atttacctctccaagtttgttaagcgttacggcggcaagaagctcgaacgtgcacgagac
ctgtttgaacaagccctcgaaaactgccctgaaaagttctgcaagcctctctacctcatg
tacgccaagctagaggaagagcacggtcttgccaagcgcgcaatgggtatctacgaccgt
gctgcatcaaccgttcaagattccgacaagttcgagatgtacaccatctacatcgccaaa
gctactgccaactttggtcttcctgccacacgaccaatttatgagcgggccctcgaatct
ttgcccgacaagcagactgcggaaatgtgtcgacgattcgcgagaatggagaggaaattg
ggtgagattgatagagcaagggcgatctatgcgcatgcgagccaattctgtgatcccaga
gttgagcccgaattctggcaagaatggaatgacttcgagatcgacactggatctgaagat
acattccgagaaatgctccgtatcaaacgagccgtccaagcgtctttcaacaccgagaca
tcgttcattgccgcccaggctgctgccgcgtccaaaggtactgaaaagcctactgatgct
tcagctcaggaagcccaggaggctgccgatcctatggctgcgatggagcgtgaattgaac
gccgttggtgctgatggcgcaagaaagggaggagcaccggcttttgtcgcgagtacatta
aacaagaccaatgccaacggaattgatgaaggagggaaagaagcaggcgaagttgcgaac
cctgatgcgatcgtcatggatgaggatgagttctaa
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integrated database retrieval system
