Entry |
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Name |
(RefSeq) hypothetical protein
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KO |
K18416 | 3'-5' exoribonuclease 1 [EC:3.1.-.-] |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:cgi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cgi03019]
CGB_E2360C
03036 Chromosome and associated proteins [BR:cgi03036]
CGB_E2360C
Messenger RNA biogenesis [BR:cgi03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CGB_E2360C
Chromosome and associated proteins [BR:cgi03036]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
CGB_E2360C
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
E:complement(join(470423..470881,470939..471376,471575..471694,471746..471895,471954..472224,472312..472655))
|
AA seq |
593 aa
MPGDSSWGSALFAKPFRPHPLDTWATEAEAVQTFSSTVPSHVEQKVDEEPEDDGERESED
GEEPEGTKEEDGPECAGRETKWIPKVSKKSTVDQLREALEQLGLNTKGKKETLLRRAQNA
IHAVNLEAALESQASTPSGDEGNPWDCGDFPPDSVLAAHFAAKEKRRQEREEMKILGQRY
RSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPDEEGKRVLEKIDSFRSYVRPTWR
PILTDFCKSLTGIQQETVDKSPIFPEVLKQLEEWLDKWDLRGDKGLKDALWVTDGVPKQL
HITPPNPFPNYFHGPYLNIKHAVQSVMSEIKRRRVYAAAHPDNAANERATQPITTSRRAG
KWRPSHGAGTVGGVGRGSPRGATPPPQEMTSPATATADNAPPSTPPKAFIRKEGDYYLNI
AGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQPMGSGKRYPWMGE
SGKVVWEEWMSSQRPQDDPAKREAEEKKKQGDSKTENAPAEESELSALAEDPVVKNPEEG
TAEPWDEGCGEYYEGFQEEESTTIDEGPQNSLVFVPRILQRKHRALMRNKAQN |
NT seq |
1782 nt +upstreamnt +downstreamnt
atgcccggagacagctcttggggctcggccctcttcgcaaagcccttcagaccgcatccc
ttggacacttgggcaacagaagcagaagccgttcaaacattctcatcaaccgtcccatcc
cacgtagagcaaaaagtggatgaggagcctgaagacgatggagaacgcgagtcagaggat
ggtgaagagcctgaagggaccaaagaggaggacggtccggaatgtgctggaagggagacc
aagtggattcccaaggtcagcaagaagagtacagtagatcaattgagagaggcgttggag
caattgggactgaatacgaaggggaaaaaggagactctgcttagacgagctcaaaatgcc
atacatgctgtcaatttggaggctgctcttgaaagccaagcttccacgccatctggagac
gaaggaaacccttgggactgtggtgattttcccccagacagcgtacttgcggcccatttc
gcggcgaaggagaagagacggcaggaaagggaggagatgaagatacttggccaaagatat
aggagtttcttgtgttttgatgtcgaggcaacttgcaggggaggaaaggagtttgactat
cccaacgaaatcattgaatttcctgtagttctggtccgatggggagagccagatgaggag
ggtaaaagggtattagagaagatagattcattcagatcatatgttcgacccacatggcga
cctatccttaccgatttctgcaagagccttactggcatccaacaagaaaccgtagacaaa
tctcccatttttcctgaagtcctaaagcaactggaggaatggcttgataagtgggatctg
aggggagacaaggggctcaaagacgctctatgggttactgatggtgttcctaaacaactt
catataaccccgccgaacccattccccaattattttcatggtccctaccttaatatcaag
cacgccgttcagtctgtaatgtccgagatcaaaaggcggagagtgtacgcagctgcccac
cctgataatgctgcaaacgaacgtgccacccagcccatcacgacaagtaggcgggcaggg
aaatggaggcccagccacggagcagggacggtaggaggggtaggtcgtgggagtccgagg
ggggcgacgccccctccacaagagatgacatcgccggcgacagcgacggctgacaatgcg
cctccttcaaccccgccaaaggcctttatcaggaaggaaggcgattactaccttaatatt
gcagggatgtgtgaagcactaggtttgggagagtttgaaggacggcaacactctgggtta
gatgatgctacaaacatttcccgtatcctcatagcactatcaagatggaacgtaatcttt
gaacccaatggagtcattcagccaatgggttcaggaaagagatatccttggatgggagag
agcggaaaggttgtatgggaagaatggatgtcatcgcaacggccacaagatgatcctgcc
aagagagaggcggaagagaagaaaaagcagggggattctaagacagagaatgcccctgca
gaagaatccgagctgtcagccttagcagaagacccggtcgtcaaaaacccagaggaggga
actgcagaaccctgggacgaggggtgcggtgagtactatgagggattccaggaagaggaa
tcaacgacaattgacgaagggcctcaaaactcgctagtcttcgtacccaggatattgcaa
agaaaacatcgtgccttgatgagaaataaagctcaaaactag |