Cryptococcus gattii: CGB_F1410W
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Entry
CGB_F1410W CDS
T02232
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3)
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_F1410W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_F1410W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CGB_F1410W
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CGB_F1410W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
10190001
NCBI-ProteinID:
XP_003194625
UniProt:
E6R7T0
LinkDB
All DBs
Position
F:join(297586..297607,297657..298264,298312..299497,299536..299623,299677..300010,300064..300087)
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AA seq
753 aa
AA seq
DB search
MALRKLQAEIDRTLKSVTTGVEVFEATFDKLNYATNTTQKDKLENDLKTQIKKLQRMRDQ
IKAWLGNGDIKDKTALLENRRLIETQMERFKALEKETKMKAFSKEGLIAQSKLDPAEKAK
RDMIDWIGSTTDELSRQIEQTEAEVESLQVGKKKKQAGERLDELEELNERREWHIGRLEI
VQRMLENGQLTVGDVEDIQEDVKYFLEANMEEDFDFDNGIYDELNLQDEEDFHDYLHEHP
SATDEPEPEPEPVVTTPAPKAIAKEKEDKKATPHRLSKSEPRDKEEEIPLSPVVLKKTPS
RKTTLDKDKKDKKDKEKEDKERKEHEREEKEREERPSSSQPTPSKPAPLPPIKYAAAAAA
AVGGSVSASAPSQATPSVPSESSREESVASPDEIAAAPISAYLPPPPPGLSRSPSQAATP
QASSPGTPGLQSRAPSTGPGTTDMTTPSQAPGSTLPPPGYHAPPSSSSAESSRAAAQAQV
AAEQAQVQAQAQAQALAQAQAQAQAQAQSQLSAAQIQAQLQATQEVQGQAGVMGNLMQSF
EVAKEICEYECFVCGCGWGCVFHYPPGWGKGKGKGRRKCPGPRPGPTKMDWQRGAREGER
GRLNLSKRRSDDANELHAALESSFANAPQQMDAEPPRYYHPQNPIKTPSYYPQSRLPILE
DKSIYSRLELDQLFYIFYYMTGTYEQWLAARELKKQSWRFHKQYLTWFQRAHNPQAITSD
YEQGGYYYFDWENSWCQRRKSDFRFEYRWLSDH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagaaaactgcaagcggagatcgaccgcaccctcaaatcggtcactacgggt
gtggaggtgttcgaagctacctttgacaaactcaactacgctaccaacacaacccagaag
gacaaacttgaaaatgatctcaagacccaaatcaagaagctccagcgtatgcgagatcag
atcaaggcttggctgggtaacggcgacatcaaagacaagacggcgttgctcgaaaacagg
cggttgattgaaactcaaatggagagattcaaagcgcttgaaaaggaaaccaagatgaag
gctttctccaaggaagggttgatcgctcagtctaaactggatcctgccgagaaggccaag
cgagatatgattgattggatcgggtcaactaccgacgaactatcaagacaaatcgagcag
acagaggcagaagttgaatctctccaggtgggcaagaagaagaagcaggctggagaaaga
ctggatgagcttgaagagctaaatgagaggagagaatggcatattgggaggctggaaatt
gtccagaggatgttggaaaacgggcaactaacggttggagatgttgaggatatccaagaa
gatgtgaaatacttccttgaagcaaacatggaagaagactttgactttgacaacggtatc
tacgacgaactcaatcttcaagatgaggaagacttccacgattatcttcacgaacatccg
tccgcaaccgatgagcccgaacctgaaccggagcccgtcgtcaccacaccggcaccaaaa
gccattgccaaggaaaaagaagacaagaaagccacccctcacaggttgtctaaatctgag
cctcgagacaaggaggaggaaatccctctcagccctgtggtattgaaaaagacaccgtca
agaaagacgaccttggacaaggataagaaggacaagaaggacaaggagaaggaagacaag
gagcgcaaggagcacgaacgggaagaaaaagagagggaagaaaggccttccagcagtcaa
cctaccccctccaaacctgctccccttcctcccatcaaatatgctgccgctgctgccgcg
gccgttgggggttctgtttctgcttctgcgccatctcaggcaactccttctgttccctcg
gaaagttccagagaggagagtgttgcttctccggatgaaattgctgcagctcctatctct
gcgtatttgccaccaccacctccaggactttcgcgttcgccttctcaagctgctactcct
caagcctcctcccctggaaccccgggccttcaatctcgtgcgccaagcactggtccggga
acgactgacatgactactcccagccaagcgcccggaagcactctccctcctccaggctat
catgcaccaccatcttcatcttctgccgagtcttctcgtgctgctgcccaagctcaagtt
gccgctgaacaagcgcaggtgcaggctcaagctcaagcccaggcactcgcgcaggcccaa
gcccaagctcaagcacaggctcaaagccagctttctgctgctcaaatccaagcccaattg
caggctactcaggaagtacagggtcaagcgggagtcatgggtaacttgatgcaaagcttt
gaggtcgctaaagagatttgtgagtatgaatgttttgtttgtgggtgcggatgggggtgt
gtatttcattacccccctggatgggggaagggcaaaggaaaagggagaaggaaatgccca
ggccctcgtccgggccccacgaagatggattggcagaggggggcaagggagggtgagagg
gggagactcaatttatccaagcgacgctcagatgacgcgaacgagttgcatgccgctttg
gaaagtagttttgctaacgctcctcaacaaatggatgctgagcctcctcgctactatcat
cctcaaaaccctatcaaaacaccatcgtactatcctcagtctcgacttcctatactcgaa
gacaagtctatctattctcgtctcgaacttgaccagttattctacatcttctactacatg
actggcacatacgaacaatggctcgccgccagggaactgaaaaagcaaagttggaggttc
cacaaacaatacttaacttggttccagcgagcacacaacccgcaagccattacaagtgat
tacgagcaaggaggatattactatttcgattgggagaacagttggtgtcagaggagaaag
agtgatttcagatttgaataccgatggttatcagatcactag
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