Cryptococcus gattii: CGB_F4510W
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Entry
CGB_F4510W CDS
T02232
Name
(RefSeq) transparent testa glabra 1 protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
cgi
Cryptococcus gattii
Pathway
cgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CGB_F4510W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgi04121
]
CGB_F4510W
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_F4510W
Ubiquitin system [BR:
cgi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CGB_F4510W
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
CGB_F4510W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
MIOS_WD40
Beta-prop_Aladin
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
10190333
NCBI-ProteinID:
XP_003194822
UniProt:
E6R8E2
LinkDB
All DBs
Position
F:join(890018..890054,890100..890524,890588..890757,890808..890963,891021..891202,891258..891541)
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AA seq
417 aa
AA seq
DB search
MSPYRLIEYDVGQPLYGVGFSNSASHPHRVALTSLVTGPTNKLYIADLSHPPDTQPSSPY
LQANNGTSGPSHPPPTYRQITSTSLSLPATKVGWEPEGSVRVDQGGRGELLATTGESLHL
WEVAKEWTEGSGHVGHNGWGNERFTLKSRSILSNTKGAHGSLPPVTSFSWNNKSPNKIVT
CSIDTTATLWDINTAQAMTQLIAHDRAVYDLCWLPASSDIFVSVGADGSLRAFDLRQLEH
STILYESSRDAPLARIAFSKKEQHMLACFGLDDSKILILDMRSPGKPVAELIGHQAPLGA
IAWGAGGTGSRGEPTGGGWLASCGDDSQLLLYDLTAPLPSSRSSSRSNFRNSNTTSPYVL
SPSVTPSSQRTPSPADAVEMMPVKGWTAKGEINNLAFTNNGDWVGCVSGTALKVLHV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctccataccggctgatcgagtacgatgtcggccaaccattatatggtgtcggcttc
tcaaactcggcttctcatccccatcgcgttgcccttacatctctcgtcactggtccaacc
aataagctctatattgcagacttgtcccacccaccagatacgcagccatcatctccatat
ctacaagccaataacggcacatcgggaccttcccatccaccaccgacgtacaggcaaata
acaagcactagtcttagcttaccggccacaaaagtcgggtgggagcccgaaggatcggtc
agagtagatcaaggtggacgtggagaactgttagcgactacaggtgaatctctgcattta
tgggaagtagccaaggaatggacagaaggaagcgggcatgtgggacacaacggctgggga
aatgagcgattcaccttgaagagccgcagtatattaagcaacaccaagggtgcccatggt
agcctgcctccagtcacatctttcagttggaataataagtctccaaataaaattgtcacc
tgttcgatagatactaccgcgacactgtgggacatcaatactgctcaggcaatgacgcag
cttattgcgcatgatcgcgcagtctatgacctatgctggcttccagcttcatcagacatc
tttgtctctgtaggcgctgacggctcgcttcgcgcctttgatctccgccaacttgagcac
tcgaccattctatatgaatcatctcgtgatgcaccattagcaaggatagcgttcagtaag
aaagagcagcatatgctagcatgttttggtctcgatgactccaagatcctcatcctcgac
atgcgcagccccggcaagccggttgcagagcttataggtcaccaagcaccattaggagcc
attgcttggggagcgggaggtacaggtagtcgaggcgaaccgaccggaggtggttggcta
gccagttgtggcgatgactcgcagctattattatacgacttgactgcacctcttccctca
tctcgttcatcttcgcgatccaacttccgaaattccaacactacttcgccctatgttctt
tctccatctgttacgccctcttctcaacgtacaccctcacccgcagacgccgtggagatg
atgccagttaagggctggactgcgaagggagagatcaacaatcttgccttcaccaacaat
ggtgactgggtcggctgcgttagcggcaccgcgttgaaggtactgcatgtttga
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integrated database retrieval system
