KEGG   Cryptococcus gattii: CGB_F6200C
Entry
CGB_F6200C        CDS       T02232                                 
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
cgi  Cryptococcus gattii
Pathway
cgi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CGB_F6200C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgi03021]
    CGB_F6200C
Enzymes [BR:cgi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CGB_F6200C
Transcription machinery [BR:cgi03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     CGB_F6200C
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Rv0078B
Other DBs
NCBI-GeneID: 10190624
NCBI-ProteinID: XP_003194994
UniProt: E6R8Q5
LinkDB
Position
F:complement(join(1184091..1184294,1184353..1184856,1184904..1184972,1185032..1185118,1185172..1185527,1185587..1185929,1185986..1186413,1186463..1187308,1187362..1187510,1187561..1187952,1188002..1188076,1188126..1188225,1188274..1188389,1188438..1188800,1188849..1188998,1189058..1189199,1189256..1189323))
AA seq 1463 aa
MDTWAVVDQNEKHYVSSDVPRRIKHIQFQPFTPKDIVRISEVQVSIAELYQNNEDGSRTT
ALQGPLDARMGPNEKGKKCATCGEDTQKCVGHYGYIKLVLPVFHIGYFRPTINMLSCICK
TCARVLLPETERASFLKRFRRPNLESLQRQSAAKAVLAACKKQNICTYCGAPNGIVKKSG
PLRISHEPYRAAKMASMKDEWMATFKNAVAENQAVATHLGKAVDDLNPLKVLNLFERVTA
EDCELLSLHPDVGRPEDYIWQYISVPPPCIRPSVASEAGNNEDDLTAKLAEIVNYNNTLA
LMMDLGRGIEMISSNWEVLGQAVALYINSQAPGMQTIGSKPIRGFVQRLKGKQGRFRGNL
SGKRVDFSGRTVIGPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQLMRQAIINGSKLHP
GANVLERKHENGSTVRISLNVMKDLEARKRYARELQIGDVVHRHVRDGDIVLFNRQPSLH
KLSIMCHRVRVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARTEALELMSVKKNL
VTPRNGEPIIAAIQDFITAAYLLSRRDRFYDRQQFTQIASYLGDANLKIEMPPPTIWKPV
RLWTGKQIFNLLMRPNKESKVLVNLEAKCRTLVDPAKEDRFPPDMSPNDGYLVIQNSEIM
CGVFDKNTVGDGKKNSVFGVILRDYGPEEAAQAMNRLAKIAARWLANIGFSLGINDVIPG
PILHASKDARVEKAYGECDVFIDLAKRGKLENAPGCDQEATLESKISKTLSDVREAVGKI
CMQELSRHNAPLIMATCGSKGSVINVAQMVACVGQQIIGGSRVRNGFQDRSLPHFRKKSK
NPPSKGFVRNSFFSGLTPPEFLFHAMSGREGLVDTAVKTAETGYMARRLMKALEDLCTHY
DLSVRNSVGGIVQFQYGDDMLDPACLEGDATPVEYVRSWTHACRTAGNQGRALFPYEVRR
IAARIYPESFILPSPPPSPPKTKGRRRKEPTPPPPVVAPALPKEWEGCHHKFRENTYKFV
VDKIVKQMVDQRLARGLPDADDEEMAEEYEALLYSDDPAVQRVLENANKVTEAQVNSFLE
NCRIRYLRAKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKVISTPIIAAELAIPESETAARIVKGRIEKTVLGDIAAVIEESWTNANAYIEVHIDMDA
VRRLQLEISLESIKWALVRANKLKIPEGSIHISQKTSRIRIWIDESDKDKGVGIYERLKF
LKRAIPSVQVKGLPAIERGVVTKDEKNEKIHRLLVTGYGLSEVMGTEGVDGLKTKTNHVM
ETQQVLGIEAARSTIYNEIQTTMKSHGMSIDPRHVMLLGDVMTYKGEVLGITRFGVQKMK
DSVLMLASFEKTTDHLFDASLYSKKDEIQGVSECIIMGTPAPGCGTSLASIVTPAPPLPA
KKPLLFETAYKAGQHRMSKIAAC
NT seq 4392 nt   +upstreamnt  +downstreamnt
atggatacctgggcggtggtcgaccagaatgagaagcactatgtgtcttcggacgttcct
cgtagaataaaacatatccagttccagccgttcacacctaaggatattgtccggatttca
gaagtgcaagttagcattgcggagttgtatcagaataatgaggatggatcaagaacaacg
gctcttcaaggacctctggatgctcgtatgggtcccaacgagaaaggaaagaagtgtgcg
acttgtggcgaagacactcagaaatgtgtagggcattatggttacatcaagctcgtcttg
cccgtattccatatcggttactttaggccaacaatcaacatgttgtcttgcatatgtaaa
acttgtgctcgtgtcctcctaccagagacagaacgcgcttctttcctcaaacgttttcgt
cgcccaaacctcgaatctctccaacgtcaatctgccgccaaagccgtcctcgcagcctgt
aagaagcaaaacatctgtacgtactgcggtgcgcccaacggcatcgtcaagaagtccggt
cccctcaggatctcacacgaaccctaccgggcggccaagatggcgagtatgaaggatgaa
tggatggcaactttcaaaaatgcggtggcggaaaatcaggcggttgcgactcatttaggc
aaggctgtggatgatttgaatccgctgaaggtgttgaacttgtttgaaagagttactgcg
gaggattgcgaattattatcactacatcctgatgttggtagacctgaagattatatttgg
cagtacatctctgtacctcctccttgtattcgaccatctgtcgcttcagaggctggaaac
aacgaagatgacctaacagccaagcttgccgaaattgtcaattacaacaacactttggca
ctcatgatggacttgggtaggggtattgagatgatttcgtccaattgggaagtcttgggt
caagccgttgccctgtatatcaactctcaagcacctggaatgcaaacaattggcagcaag
cccatccgaggcttcgtacaacgtctcaagggtaagcaaggtcgattccgaggtaacctt
tcgggtaagcgtgtcgacttctctggacgaacggtcattggtcccgacccgaatcttcgt
atcgacgaagtcgccgttccagaaaaggttgccgtcaagctttcctacccagaacgagtg
acagattacaatctccagctcatgcgacaagcgatcatcaatggttccaagcttcatcct
ggtgccaatgtgctggaaagaaagcatgagaatgggtccactgtgcgaatctcgctaaat
gtgatgaaggacttggaagcgaggaaaagatatgcgagagagttgcagattggggatgtt
gtgcaccgacatgtgagggatggagatatcgtgttgtttaaccgacaaccgtctttgcac
aagctttctatcatgtgtcatcgagtacgagtcaggccttggcgaacgttccggttaaac
gaatgtgtctgtaacccttacaatgccgattttgacggcgacgaaatgaatttacacgtt
ccgcaaaccgaggaagctcgtacggaagctctcgaactcatgtcggtcaagaagaacctg
gttacaccgcgaaacggagaacccatcattgctgctatccaggatttcatcacagcagcc
tacctcctttctcgaagagaccgattctacgatcgacaacagttcacgcagattgcttct
tacctcggtgatgccaacttgaagattgagatgcctcctcctactatctggaaacctgtc
agactctggactggtaaacaaattttcaaccttctcatgcgacccaataaagagtccaaa
gtactcgtcaatctggaagccaagtgcagaacgctcgtcgatcctgcaaaggaagaccgt
tttcctcccgacatgtctcccaatgacggataccttgtcatccagaatagtgagatcatg
tgtggtgtatttgacaaaaacacggttggtgacggaaaaaagaactcggtgtttggtgtc
attttgagagattacggacctgaggaagcggcgcaagcgatgaacagactagccaagatt
gcagctaggtggttagcaaacattggtttctctctcggtatcaacgacgtcatccccggt
cctatcctccatgcgtctaaggatgcccgtgtcgagaaagcttatggtgaatgtgacgtt
tttatcgaccttgctaagagaggcaagttggagaatgcgcccggttgtgaccaagaggcc
actttggaatcaaagatctcaaagacactttccgatgtccgagaggctgtcggtaagatt
tgtatgcaggaactgagtaggcacaatgcccctcttatcatggccacttgtggttctaaa
ggttccgtcattaacgtcgcccaaatggttgcttgtgtcggtcaacaaattattggtggt
tctcgtgttcgaaatggtttccaggataggtcgcttcctcatttccgtaaaaagtccaag
aaccctccatccaagggttttgtccgcaattctttcttctctggcctcactcctcccgaa
ttccttttccacgcgatgtctggtcgagaaggtttggtcgacactgcagtcaagactgcc
gaaaccggttatatggctcgtcgattgatgaaggcgcttgaggacttgtgtacgcactac
gatttgagtgttagaaattcggttggaggtatcgtgcagttccaatacggtgacgatatg
cttgatccggcttgtttggaaggtgacgctacgcctgtggagtacgttcgaagttggacg
catgcttgtcgaacggctggtaaccaaggacgagctctgtttccttatgaagttcgccga
attgccgctcgaatttatcctgaatctttcattcttcctagtccccctccatccccacct
aagacgaagggtcgccgtcgcaaggaacccaccccaccgccgcctgtcgtcgcccctgct
cttcccaaggagtgggaaggttgtcaccacaagttcagagagaatacctacaagtttgtt
gtggataagatcgttaagcagatggttgatcagagactggcgaggggtttaccggatgcg
gatgatgaggaaatggcggaggagtacgaggcattgttgtactctgatgatcctgctgtt
cagcgtgtgctggagaatgccaacaaggttaccgaagcgcaagtcaactctttccttgaa
aactgtcgtattcgataccttcgagccaagattgaacccggatctacggtcggtgccgtc
ggtgctcagtctattggtgaacctggtacacagatgacgttgaagactttccattttgct
ggtgtcgcttcgatgaacgtcactttgggtgtgccccgtatcaaggaaattatcaacgct
gcaaaggtcattagtacgccgattattgcggctgagttggccattccagagagtgaaacg
gctgcgaggattgtaaagggacgaatagagaaaacagttttgggtgatatcgcggcagtg
attgaggagagttggacgaatgcgaacgcttacattgaggttcacattgatatggatgct
gtgcgacgacttcaactcgaaatttcattagaatctatcaaatgggcattggttagggcc
aacaagctcaagatccctgagggctctatccatatttcacaaaagacttcacgtatccgt
atctggatcgacgaatcagacaaggacaagggtgtcggcatctacgaacgtctcaagttc
ctcaagcgcgccatcccctctgtccaagtcaagggactccctgcaattgaacgtggtgtc
gttaccaaggacgagaagaacgagaagatccatcgattacttgtcactggttacggttta
tcagaggtcatgggtacggaaggtgtcgacggtctcaagacgaagacgaaccacgtcatg
gaaactcaacaggttcttggtattgaagccgccagatcaactatttacaatgaaattcag
acgaccatgaagtcgcacggtatgtcaatcgacccgcgacatgtcatgttgttgggcgat
gtcatgacctacaagggtgaggtgttgggtatcacaaggtttggtgtgcaaaaaatgaag
gattcggttctgatgttggcgagtttcgagaagacgacagatcacttgtttgacgcttct
ttgtattcgaaaaaggacgaaattcaaggcgtatcagagtgtatcatcatgggaactcct
gctcctggttgtggtacttctctggcgtctatcgtcactcccgctccaccattacctgcc
aagaaacccttgctgtttgaaacggcatacaaggctggccagcatagaatgtcaaagata
gcggcgtgctag

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