Cryptococcus gattii: CGB_G1420C
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Entry
CGB_G1420C CDS
T02232
Name
(RefSeq) ATP dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_G1420C
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGB_G1420C
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
90S particles
Helicases
CGB_G1420C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AF-4
PTPRCAP
T4SS-DNA_transf
DUF4611
Motif
Other DBs
NCBI-GeneID:
10188921
NCBI-ProteinID:
XP_003195133
UniProt:
E6R939
LinkDB
All DBs
Position
G:complement(join(315293..315663,315738..316264,316312..317180,317233..317319))
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AA seq
617 aa
AA seq
DB search
MASAFSLLTAGGAKFDKSRFKDDFQLFEAKKRKDRKGKSKQVDIVATGSALPISLDFFGD
HPHSQHKPQPESESESDSESDSGSSSTSIPAPPPQKITLTGSEPLPKSLHTNLPSLVNHE
SHSLTSAEGGPLLSALSQANIHSLWGVQCAVGGCLLEDRDTLCVAPTGSGKTLSYVLPTI
VKLRDPARKLKGTEEGKGVRALVVVPTHDLAVQIQGVIKAVTRGRHWRSMVLTKATEKAV
WESAPGEAVRAGEDSDNEMKDEDSADEEDDEDDNESTGSVNEFAPKVSGNPEGLGIDVLV
ATPERLHHLIDSRRISLAQTKYVILDESDRLLSSDFLPQVEPILSACTNPTVQKCFLSAT
MPAGAEALAKKWLKDGGVRVVVGVKDSAVTTVDQSLLYTGSESGKLLALRNLISSGQLPY
PSLIFVQSIERAEELYKTLVLDGIKVDAVHGGKAKTKRDEAIEDFRMGTVWMLVVTEVLA
RGMDFRGVKVVINYDFPQTVPSYIHRIGRTGRAGRPGKAITFFNIEDGPYLRTIANVLRS
SGCPVPEYMLDMKKPTKNEKKKLAKAPPKRKAVGGGGRDLNREAGKKKKQMVEASKKRKM
LGKGGRGEEKEKKDDEE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcattcagtttgctcacagcaggaggagcaaagttcgacaagtccaggttc
aaggacgacttccagctctttgaagcaaagaagcgtaaggatcgtaaaggcaagagcaag
caggtggacattgtggccacaggatcagcccttcccatctcattagacttctttggagac
catccccactctcagcacaagccacagccagaatccgagtctgagtcagactctgaatcc
gactctggttcctcctcaacctctatccctgcacctcctccccaaaagatcacccttact
gggtccgaaccacttcccaaatctcttcacaccaacctgccgtcattagtcaatcacgaa
tcccattcacttacatctgccgaaggaggcccacttctctctgcgctctctcaagcaaac
attcactcactttggggtgtacagtgcgcagtcggaggatgtctgttggaagacagagat
actctctgtgtcgctcccactggttctggaaagacactgtcttatgtgcttcctactatc
gtcaagctgcgtgatcccgcaaggaaactcaagggcaccgaagaaggcaaaggtgtgaga
gcattggttgtggtgcccactcacgatttggcggttcagatccagggtgtcattaaagca
gtaaccaggggcaggcattggaggtccatggtccttacgaaagctaccgagaaggcggtc
tgggaaagtgctccaggggaggctgttagggcgggcgaggatagtgacaatgagatgaag
gatgaggacagtgcagacgaggaagacgacgaagacgacaatgaatctactggctctgtg
aatgagtttgctcccaaagtctctggtaaccctgaaggacttggtatcgacgtgctcgtc
gctacaccagagcgtcttcaccatctcatcgattctcgacgaatttcccttgcccaaaca
aaatacgtcatcctcgatgaatcagaccgtcttctctcatctgatttcctgccccaagtc
gagccaatcctctcagcatgcaccaaccctaccgtccagaaatgcttcttgtccgccacc
atgcctgcgggcgccgaagccctcgccaaaaaatggttgaaggatggtggcgttcgagtg
gtcgtgggtgtgaaagactctgcagtcaccactgtcgaccaatcccttctttacacaggt
tctgaatccggtaaactcctcgccctccgaaacctcatttcctccggtcagcttccatac
ccttcactcatctttgtccagtctatcgagcgtgcagaagagctttacaagacgctggta
ttggatgggatcaaggtggatgctgtgcatggtggtaaggcgaaaacgaagagagatgag
gcgatcgaggactttaggatgggcaccgtctggatgctggttgtcaccgaagttttggcg
cgaggaatggactttagaggtgtcaaggttgtcatcaattacgacttcccccagactgtc
ccgagttacatccaccgaataggtcgtaccggtcgagccggtcgtccaggaaaagccatc
acattcttcaacattgaagacggtccttaccttcgtaccatcgccaacgtcctccgctct
tctgggtgcccagttccagagtacatgctggatatgaagaagcctaccaagaacgagaag
aagaagctcgccaaggccccgccgaagaggaaggcagttggtggaggtggaagggacttg
aatagggaagcagggaagaagaagaagcagatggttgaagctagtaagaagaggaagatg
ttgggaaaaggggggaggggcgaggaaaaggagaagaaggatgatgaggagtag
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