Cryptococcus gattii: CGB_G3360C
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Entry
CGB_G3360C CDS
T02232
Name
(RefSeq) subunit of heteropentameric Replication factor C (RF-C); Rfc3p
KO
K10755
replication factor C subunit 2/4
Organism
cgi
Cryptococcus gattii
Pathway
cgi03030
DNA replication
cgi03410
Base excision repair
cgi03420
Nucleotide excision repair
cgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGB_G3360C
03410 Base excision repair
CGB_G3360C
03420 Nucleotide excision repair
CGB_G3360C
03430 Mismatch repair
CGB_G3360C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgi03032
]
CGB_G3360C
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_G3360C
03400 DNA repair and recombination proteins [BR:
cgi03400
]
CGB_G3360C
DNA replication proteins [BR:
cgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CGB_G3360C
DNA Replication Termination Factors
ELG1-RFC complex
CGB_G3360C
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CGB_G3360C
DNA repair and recombination proteins [BR:
cgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CGB_G3360C
Check point factors
HRAD17(Rad24)-RFC complex
CGB_G3360C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
nSTAND3
AAA_3
RCF1-5-like_lid
RuvB_N
Viral_helicase1
Mg_chelatase
Gp44_lid
Rad17
NTPase_1
MeaB
DNAX_ATPase_lid
AAA_assoc_2
AAA_19
AAA_24
AAA_5
RNA_helicase
KTI12
PrpR_N
SRP54
FtsK_SpoIIIE
AAA_30
AAA_28
NB-ARC
Motif
Other DBs
NCBI-GeneID:
10189042
NCBI-ProteinID:
XP_003195262
UniProt:
E6R9G2
LinkDB
All DBs
Position
G:complement(join(641771..641887,641945..642271,642321..642516,642572..642673,642727..642945,643001..643083))
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AA seq
347 aa
AA seq
DB search
MASGSLSNNKGISATAKHTDAEGYEMPWVEKYRPVLLDDIVGNSDTVERLKVIAEDGNLP
HIIISGMPGIGKTTSIHCLAHALLGEAYKEGVLELNASDERGIDVVRNKIKSFAQRKVTL
PPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAILRY
SKLNDAEVLKRLKEICDMESVKYNDEGLAALIFTAEGDMRQAINNLQSTWSGFGFVSQDN
VFKICDQPHPIVIRQMIKDCQYGKIDEALARVNALWDQGYSAVDIVVTVFRVVKGMEELP
EYLKLEFIREIGWTHMRILEGVGTLVQLGAMIARLNKFALPPNTLKI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggatccttatcgaacaataaaggcatctcggccacggctaaacacaccgat
gctgaaggttacgaaatgccctgggtcgagaagtatcgtccggtccttttggacgatatt
gttggcaactcggataccgttgaacggttgaaggtcattgccgaggatggtaacttaccg
catatcatcatctctggtatgccaggtatcggaaaaaccacttctatacattgcctggcg
catgcgcttctgggagaagcgtacaaagagggggtattggagttgaatgcgtccgacgag
cgaggtatcgacgtggtccgaaacaaaattaagtcattcgctcaaagaaaagtcaccctc
ccacctggaagacacaaaattatcattcttgatgaagcggattcaatgacagccggtgct
caacaagcccttcgtcgaactatggagatctactccaacactactcgttttgccctcgcc
tgtaacatgtccaataagatcattgaacctatacaaagtcgatgtgcaatcttaagatat
agcaagcttaatgatgccgaggtattgaagcggcttaaggaaatttgtgacatggagagc
gtcaagtacaatgacgaaggcctcgccgcactcattttcactgctgagggcgacatgcgt
caagcgattaacaatctccaatctacctggtcaggtttcggctttgtcagccaagataac
gtattcaaaatttgcgatcaaccccatcctattgttatccgccaaatgatcaaagactgc
caatatggcaaaattgatgaagcccttgccagagtgaacgcgctttgggatcaaggatac
tcggcggtggatattgttgtgaccgtgttcagagtcgtcaaaggcatggaggagctgcca
gagtacttaaagttggagttcatccgcgagattggctggactcatatgcgtatccttgaa
ggcgttggaacgctcgtccaactgggcgccatgatcgctcggttgaacaagttcgctctt
ccccctaataccctcaaaatatag
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