KEGG   Cryptococcus gattii: CGB_G3450C
Entry
CGB_G3450C        CDS       T02232                                 
Name
(RefSeq) SSD1 protein
  KO
K18748  protein SSD1
Organism
cgi  Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_G3450C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     CGB_G3450C
SSDB
Motif
Pfam: RNB OB_Dis3 Dis3l2_C_term CSD2 Rrp44_CSD1 OB_HELZ2 Rrp44_S1
Other DBs
NCBI-GeneID: 10189047
NCBI-ProteinID: XP_003195258
UniProt: E6R9H1
LinkDB
Position
G:complement(join(667030..667049,667107..667438,667487..667572,667626..667765,667818..667895,667949..668012,668058..668142,668194..668438,668486..668635,668689..668812,668865..669075,669122..669285,669337..669489,669542..669825,669883..670995,671037..672800))
AA seq 1670 aa
MADPVSPTPDHQSQATLAPPPVNPSRPSSANSQKSNSSRGRGKNGSRGSSNMSRTNSNTS
GQSDSGRSDKKRQSGPTTTISGGVSLGVSGEAPQQGKKGKGKGKNQDKEKESERKELSMG
VEKPQKNNSQKGKRSASGRRPQAIGTSESPRTVSRNSEGVNMSADAGSSQSAPEPKSIHA
AVSAPRTAIEAAVEAATEKHRLQTGGDALASLQKMISDLKTLPPTSGPGSGSSAGSRSTS
VTRDRPTSSSAKAEPVAIPSASNSGSHKTLKADAPTFTPSFQSFSPVASTSGLSVSPTNT
MPTLAQSHPRSQSQSNGAHPRRTSASSMSSVNFAPPFNPSPIQAFGNPLPPFYQTPLSVH
AEADDESLSPLSFAQHASFQYQQQQLLAAQQQQYQYIQLLQAQLAASQLAHQQAQQAAQH
QNQQMGNFIAPRFQALAAQRAASLQQQQAAQLAQAQQVFELQQAQLIQQQEEARTSLQAA
VEAAHPQNQPVFEEESPELQPRTVGPSGRPQLAPSFTFGARPKHGATESVSERGSGRESL
SPPQSSLSPIVVNRSEGIGGAAATGLAGLAARAHKRTGSEMSSVLQQQLAIQQEIEALQA
KQKALMQQDLAEQGDSPLAQLNTAYAQKPTPSQNVSRHRRVQSSLPSASVPVDFEREQDQ
PRSMKSVGEMPPPSLPSGHGRRHSVNVLNKTAGSGIGFGLADDIPEGVVAPSGHHRSGSR
SGLESGSWRLGASPGNAQSSQSQVADLAAAQAQLQSLAQFRAAAGGGHSKMASFSFPNML
PNLLAATTLQAPVGQSLWQQQQAFQMQLQQTTQGPQRKSLFAPYLPQASLPPLLQAGKLV
VGVLRVNKKNRSDAYVATDVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWSTKKDKE
EKKRKKEENATYDLKPSTLKKLEKKKDDVEVEGQGLTLFDDEEVNDDTKPTYAGHVVAVV
ERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPETRPKIVWFKPTDKRVP
LIAIPTEQAPADFIDNPDAYSNKLFVATIKRWPITSLHPFGTLVEELGTIGNSEVETSAL
LKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFTIDPHHAKDLDDALSFK
DNKNGTFNVGVHIADVSFFVKANTQLDREARKRATSVFLVQRAVPMFPPVLSEDLCSLVP
DTERLTFSAIFTVDEEGNVLQKKFAKTIIKSCAKLTYDDALTVVNGGALPRSKTSGTHLA
TDIEGDIRSLHSIAKKMRARRIENGAMVVSSLKVSFEFDAQGRPVDCQTYQKGKASTIVE
EFMLLTNQSVARIIANALPEQALLRRHEPPSERRLASFVTRATKLGFDMDPTSAGTLQKS
FENVLDNDSALCIDLLRKKVIQRARYFCAGMLDIAKYAHWGLNAPLYTHFTSPIRRYADV
LVHRMLDACLTSPNPNEVKFLMDRDQVAKAAQQCNMKKQSAKLAEEQSVHLFLCILINDL
TQHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKMPVETAVYDEHRDILSLYWTTK
DVISHLADTTEDRHLLKIKSLGEQRALGSSVSKATDDSALFDGNDAGVVSKQYTKSANPS
PLKFEGLRSVDGGHKVQDIKELMTLPVIITSDMTKSPPVLVVYACNPYAT
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggccgaccctgtgtccccaactcccgatcatcagtctcaggcgacccttgcgccacct
cccgtcaatccttctcgtccaagttctgcaaactctcagaagagtaattcttctagaggt
cgtggtaaaaatggaagtcgaggatcatctaacatgtctcgaaccaattcgaacacttct
ggtcagtcagacagtgggcgaagcgataaaaagaggcagagcggtcccacaaccacaatc
agcggtggtgtgagtttgggtgtgagtggagaggcacctcagcaaggcaagaaagggaaa
ggcaagggaaagaaccaggataaggaaaaggaaagcgagagaaaagaactctcaatgggg
gttgaaaaacctcagaagaacaacagtcagaaagggaaaaggtctgcctcgggaagaaga
ccgcaggccatcggtacaagtgaatccccgcgtactgtgtcgcgaaactcggagggtgtc
aacatgtcggcggatgctggctcgtcgcagtctgcgcctgaaccaaagtctattcacgct
gccgtgtctgctccacgcactgcaattgaagccgcggtggaggctgcgaccgagaagcac
agattacaaacaggtggcgatgctcttgcgagcttgcagaaaatgatttccgatctaaag
acccttcctcccacttctggacctggaagcgggagttctgccggatcgaggtcgactagt
gtcactcgggaccgtcccacttcttcttcggctaaagccgagcctgtcgctattcctagt
gcttccaactcgggatcccacaagactttgaaggctgatgcacctacgttcaccccttcc
ttccagtcgttctctccggttgcctcaacatcaggtctttcagtctctcccactaacacc
atgccgacactcgctcagtcgcatcctcgctcccagtctcaaagtaacggggcccatcct
cgcagaacttctgcgagctccatgtctagcgtgaactttgcccctcccttcaacccatcg
cctatccaggcgtttgggaaccctcttcctccattctatcagacgccattatcagtccac
gctgaagcggacgacgaaagtctttcgccgttgtctttcgcacagcatgctagtttccag
tatcagcaacagcagctccttgcagctcagcaacagcagtatcagtacattcaacttctt
caagcgcagctcgcagctagtcagcttgcccatcagcaagctcaacaagccgcacagcac
cagaaccaacaaatgggaaacttcattgctcctcgtttccaagcgcttgcagctcaaaga
gctgcctctctgcaacagcagcaagctgctcagcttgcgcaggcccaacaagtattcgaa
cttcaacaggcccagctgattcaacaacaggaagaagctcggacgtccctccaggctgca
gtggaagctgctcaccctcaaaatcagcctgtattcgaagaggaatccccggaactccaa
ccccgtaccgttggaccgtccggtagacctcagcttgctccttctttcacctttggagct
agaccgaagcacggtgccacagaaagtgtatcggaacgaggttccggaagagaatcgttg
tcgcctcctcaaagcagtctatcacctattgtggtgaatcgaagcgaaggtattggaggt
gccgctgccactggtcttgcaggtctggctgctagagcacacaagagaactgggagtgaa
atgtcatcagtcttacagcagcagcttgctatacaacaagagatcgaagccctccaagct
aagcagaaagctctcatgcaacaggatttggccgagcaaggcgacagtccgcttgcgcaa
ctgaacactgcatacgcccagaagccaacaccctctcaaaacgtctcccgccatcgccgt
gtgcaatcaagcttgccttcggcttctgtccctgtcgacttcgaacgcgaacaagaccaa
cctcgttcaatgaaatctgtcggcgaaatgccccctccatctttaccatcaggtcacgga
agacgccacagcgtcaacgttctcaataagactgccggttctggtataggcttcggcttg
gcggatgacatccctgagggtgttgtagctccctctggacaccatcgatctggcagccga
tcgggacttgagagcggcagctggcgtcttggtgcatcgccaggcaatgctcaaagcagt
cagagccaagttgctgaccttgcggcggcccaagcccagcttcagtctctggcacaattc
cgagcagctgctggtgggggtcactccaagatggcttcgttcagcttccccaatatgtta
ccaaacttgcttgccgcaacaactttgcaggcaccggttggccaatctctctggcaacaa
cagcaagcatttcagatgcagttgcagcagacaactcaaggcccacaacgcaagtctctc
tttgcaccctatcttccccaagcttcattaccgcctctccttcaggctggtaaactcgtc
gttggcgtactgagagtcaacaagaaaaatcgatccgatgcttatgtagctacagacgtt
ttggatgccgacatatacatctgtggctcaaaggacaggaacagggcgcttgaaggtgac
atagtcgctgttgaattgctggatgttgatgaggtgtggagcacaaagaaggataaagag
gagaagaagaggaagaaggaggagaacgcgacgtatgacctgaaaccctcgactttgaaa
aagctcgaaaagaaaaaggatgatgtggaggtcgagggtcagggcttgaccttgtttgac
gatgaagaagtgaatgacgacacaaaacctacttacgctggtcatgtcgtggccgtggtt
gagcgaatgcccgggcagttgttctccggacagcttggtgttctccgtccatcctcagca
gccacgaaagaaaagcaagagcttgaacgtcgcgagagggagggcgacaaagccaggaag
gaagagcctgagacccgcccaaagattgtctggttcaagccaacggataagcgagtgcca
ttaattgccattcctacggaacaagctcccgccgatttcatcgacaaccccgacgcatat
agtaacaagctcttcgtggctacaatcaagcgatggcctatcacctcactccatcctttc
ggtactctcgtggaagagcttggaaccatcggcaactctgaagttgagaccagtgccttg
ttgaaggattgtaacttccccactgaagagttctctgaaatgaccatgaaatgtttgcca
cctatgccgtggagcgtcccggagcgagagtacgatgttcgaacggatctgagggaggag
agagtcttcacaattgacccacaccacgcaaaggatttggacgacgctctttctttcaag
gataacaaaaacggaacttttaatgttggcgttcacatcgcagatgtatctttctttgtc
aaagccaacactcaacttgaccgggaagctcgtaagcgtgccactagtgttttcctagtt
cagcgcgctgtcccgatgttccctcctgtgttgtccgaagatctctgcagccttgtccca
gatactgaacgactaacgttctcggctattttcactgtggacgaggaaggcaatgttctg
caaaagaagtttgcgaaaaccatcataaaatcttgcgctaaattgacctatgacgacgct
cttactgttgtaaacggtggtgccttgccccgatctaagacttccggtacacacttagct
actgatattgagggagatataaggtcattgcattccattgccaaaaaaatgcgagccaga
cgaatcgagaatggagcgatggttgttagctcattaaaagtatcattcgagtttgatgct
caaggtcgtccagtcgattgccagacgtatcaaaagggcaaagcatccacaatcgtggaa
gaatttatgcttctcacaaaccagtcagtggctcgcattattgcgaacgccctccccgag
caagccctccttcgccgccatgagccgccctcggagcgcaggctggcatcatttgtcact
cgagcaaccaaactgggctttgatatggatcctacaagtgcgggaactttgcaaaagtca
tttgaaaatgtactagacaacgactctgccctctgcattgatcttttgaggaagaaggtt
atacaaagggcccgatacttttgcgctggtatgctggatattgcaaaatacgcacactgg
ggtttaaacgccccattatatacccatttcacctctcccatccgtcgctatgccgatgtt
ctcgtccaccgcatgcttgatgcctgcttgacaagtcccaatccaaacgaagtcaagttc
cttatggacagggaccaagtagccaaggcagctcaacagtgtaatatgaagaagcagagc
gccaagctggctgaagagcaatcagttcatctcttcctttgtattctcatcaatgatttg
acgcaacactacggccctgttgtccgtgaagctagagtaacaaacgttcttgagactgca
ttcgatgtaatcattcccgaattcggcgttgaaaaaagagtgcacgtagacaagatgcct
gtggagactgctgtctacgatgaacatcgcgatatcctatcgctatactggacaacgaag
gacgttatctcacaccttgccgataccaccgaggatagacacttactgaagattaagtct
cttggagaacaacgtgcccttggatcctctgtttccaaggctactgacgactctgctttg
ttcgatggcaacgatgcaggcgtggtttctaaacagtatacaaagtcagccaacccgtca
cctcttaaatttgaagggctccgctctgtggatggaggtcacaaagtccaagatattaag
gagttaatgaccttgccagtcatcattactagtgacatgactaagagtccacctgtttta
gttgtgtatgcttgtaatccatacgcgacgtag

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