KEGG   Cryptococcus gattii: CGB_G3490C
Entry
CGB_G3490C        CDS       T02232                                 
Name
(RefSeq) pre-mRNA splicing factor
  KO
K12816  pre-mRNA-processing factor 17
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_G3490C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_G3490C
Spliceosome [BR:cgi03041]
 Complex C
  Other components
   Step II factors
    CGB_G3490C
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_NOL10_N YNCE
Other DBs
NCBI-GeneID: 10189067
NCBI-ProteinID: XP_003195253
UniProt: E6R9H6
LinkDB
Position
G:complement(join(689583..689633,689693..689964,690036..690246,690300..690653,690706..690836,690892..691311,691367..691517,691578..691835))
AA seq 615 aa
MPSLVAGYGSSDDESPSLNASTSLPTLGGSFNSNDAAVDDYEDDEKIEEEAEKDAFGLTS
MVKSERETESKRQKEVVTSAPDVLKEDPNGAGMAIITRPTDKVMNVNLTYEEMSRPVAGP
ENPFDKRKNKGMNTLSGHVEEQSMDDYSFLMAQRTFDVHGYAVNPSIQNAATPIVGSLAN
AYQNGYNSIENIRPTRSERKETKRKRGGKGDASVVDGEGAYMGPWANWQQDKQEAPVIEE
EEDDEEWREEKRRREEASAAAKEKMKTAMEEKSIFHGKELYDYAGRTYMHIPTDKDVKLN
PSDGAPPPNAYLPERCIHTWTGHNKAVSAVRLFPRSGHLLLSASMDTKVKLWDVYNEGNC
LRTFLGHSQAVKDIAFNNSGDKFLSASYDKHIKLWDTETGKCIQAFTNGKIPNVVKFNPD
GDKQHIFMAGMQDKKIIQYDLREREIVQTYDQHLGPVNTITFVDENRRFVTTSDDKTIRG
WDYDIPVVIKYIAEPYMHSMPAVTLHPSKRYFACQSLDNQILVYSADGSFRQNKKKRFAG
HTIAGYACNIGFSPDGKYISSGTGSGEMVFWDWKSGKIMKRLKAHKEVVIDHAWLPNEHS
KLVTASWDGLIKLWT
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgccttctctagtcgcgggttacggatcttcagacgacgagtcaccttccttgaacgcc
tccacttctctgccgacacttggtggaagctttaactccaatgacgcggcagtggatgat
tacgaggatgatgagaaaattgaagaagaagccgaaaaagatgcttttggtctgacatct
atggtgaaatcggagagagaaacagaatcgaaaaggcaaaaagaagtggtcacttctgca
cctgatgtgctcaaggaagatcccaatggtgccggaatggccatcataacaagacctaca
gacaaggtcatgaacgtcaatttgacttacgaggaaatgagccgccccgttgccgggcca
gagaatccattcgacaagagaaagaacaaggggatgaacactttatcagggcacgtcgag
gagcaatctatggacgattattctttcctcatggctcaacgcacctttgacgtacatggc
tacgccgtcaacccttccatccaaaacgctgcgacccctatagttggctctctggccaat
gcttaccaaaacggatataattccatagaaaacataaggcctaccagatccgaacgaaaa
gaaactaagcggaagcgaggtgggaaaggagacgccagcgtcgtcgatggcgaaggggcc
tatatgggcccgtgggccaattggcaacaagacaaacaggaggctccagtgatagaagag
gaagaggatgacgaggaatggagagaagagaagaggaggagagaagaggcctctgcagcc
gccaaggagaagatgaagactgcgatggaagagaagagtatcttccatggcaaggaactt
tacgactatgcagggcgaacatatatgcacattcctaccgacaaggacgtcaagctcaat
ccatcagacggtgctccgccccctaatgcctatctgcctgaacgatgcatacatacttgg
actggccacaacaaagctgtttctgccgtccgcttattccctcgcagtggtcaccttctg
ctttctgccagtatggacacgaaggtcaagctttgggacgtttacaatgaaggcaactgt
ctgcgaacattcctcggccactctcaagctgtgaaggatattgcttttaacaatagcgga
gacaagttcctttcagcatcctacgataagcacatcaagttgtgggatacagagacgggc
aaatgtatccaggcgttcacgaacggcaagattcccaatgtcgtcaaatttaatcctgat
ggagataagcaacacattttcatggccggtatgcaagataagaagattatccagtatgac
ttacgagagcgtgaaattgtgcaaacttatgatcaacatcttggccctgtaaacaccatc
acattcgtggatgagaaccgacgatttgtcactacttctgatgacaaaaccatccgaggc
tgggactatgatattcctgtcgttatcaaatacatcgccgagccttacatgcactccatg
ccggcggttaccttgcaccccagcaaacgttattttgcttgtcagtctcttgataaccaa
atccttgtctactctgccgacggcagcttccgtcaaaacaagaagaagcgtttcgctggc
catactatcgcggggtatgcttgtaatattggtttctcgcctgatggcaagtacatctct
tctggtactggcagcggtgagatggtgttctgggattggaagagtggaaagattatgaag
aggttgaaagcacacaaagaggtcgtcattgatcatgcatggcttcccaacgaacattct
aagcttgtcaccgcatcctgggatggtttaatcaaattgtggacttag

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