KEGG   Cryptococcus gattii: CGB_G6460W
Entry
CGB_G6460W        CDS       T02232                                 
Name
(RefSeq) U5 snRNP-specific 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_G6460W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_G6460W
Spliceosome [BR:cgi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CGB_G6460W
 Complex C
   U5 SnRNP specific factors
    CGB_G6460W
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_like Beta-prop_WDR35_TULP_N TibC_1st Beta-prop_RIG_1st eIF2A PEP5_VPS11_N
Other DBs
NCBI-GeneID: 10189286
NCBI-ProteinID: XP_003195454
UniProt: E6RA42
LinkDB
Position
G:join(1269445..1269651,1269702..1269774,1269832..1269941,1269989..1270279,1270329..1270696,1270763..1270838)
AA seq 374 aa
MSVRKSPPTAGPGMALAKRARVEDEADENTMVMTVASSGEGQRKNALIRSVKRTSSLEAP
IVSLSAAHGGEITACVFDPSGQTLAASSVDRSISLWKTYPPHDNYGILPNVHKTAILDIA
YSFDSETIYSGAADGTLISTDLRTGERISRYSAHYGPLNSISVTISGGRELVLTGGDDGI
ARVWDFALDGKDPVAEFDDERDCPVTAVEWSSDGNQCFVGGVDNTIKVWDLRTTKVLYAL
HGHTDTIASLSLSPNGHYLASYALDSALIIYDVQPFSSDPMRVYRSLTGAPAGFEQTLIR
CAWTKHDGGQRIAVGGGDRTVTVWEVETGKVLYKLPGHKGTVTGVDFHPREPIILTGSKD
TNMLLGELDAQDFS
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtccgtcaggaagtcgccacccacagcaggcccgggaatggccctcgcaaaacgcgct
cgagtggaggatgaggccgacgaaaacaccatggtcatgaccgttgcttcttcaggcgag
ggacagcggaaaaatgctttgataaggagtgtcaagaggacgagcagtctcgaagcccct
attgtgtcactctcggctgctcatggtggcgagattacggcttgcgtgtttgacccctca
ggacaaactcttgcggctagttcggtggatcgcagcatttccttgtggaagacctatccc
cctcatgacaactatggcatccttccaaacgttcataaaaccgctatccttgatattgcg
tactccttcgactctgaaaccatctattccggtgctgccgatggcacactcatatctact
gacttacgtaccggtgaacgcatttcccgttattctgcacactatggccctttaaactct
atatccgttaccatttctggcggtcgagagctcgtgttgacaggtggcgatgatgggatt
gcccgtgtatgggatttcgcgctggatgggaaagaccctgtagcagagtttgatgatgag
agagattgtccggtgacagctgtggagtggagttcagatgggaaccagtgtttcgttggt
ggagttgacaacaccatcaaggtctgggacttgcgaacgaccaaagttctctacgcgctt
cacggccacaccgacaccatcgcttccctttccctctcccctaatggccactacctcgcc
tcttacgctctcgattctgctctcatcatctacgacgtccaacccttctcatccgatcct
atgcgtgtgtacagatccctcacgggcgcacccgcaggttttgaacaaaccctcatacga
tgtgcgtggacaaaacatgatggcggacaaagaatagcggtaggaggtggagataggact
gttactgtttgggaagtagagacaggcaaggtgctgtacaagcttccagggcataaggga
actgtgactggtgtggattttcaccctagagaaccgatcatcttgacaggatcaaaagac
acaaacatgttgcttggcgagctggatgctcaagatttctcatag

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