Cryptococcus gattii: CGB_H1040W
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Entry
CGB_H1040W CDS
T02232
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGB_H1040W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgi03021
]
CGB_H1040W
Enzymes [BR:
cgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGB_H1040W
Transcription machinery [BR:
cgi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CGB_H1040W
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
10189472
NCBI-ProteinID:
XP_003195583
UniProt:
E6RAD8
LinkDB
All DBs
Position
H:join(222286..222351,222400..222941,223170..225365,225415..225640,225694..226002,226055..226105)
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AA seq
1129 aa
AA seq
DB search
MKQQYGDKKGADWYSKGVKTVEDKWQLLPAFLKVKGLVKQHLDSFNYFVNVDIKAILAAN
SLVISDINPKYYIRYTDIRVGRPARHDANQVASALSPMECRLTDSTYSAPIYVDVEYMGE
EKRSKQRGVQIGMLPVMLRSDLCNLKGKNEAELARMGECPMDPGGYFVVKGTEKVILVQE
QLSKNRILVMKDKKDEVMAEVTSSTHDRVVKTYVVSKANRLYLRHNSFKEFIPIVIALKA
MGLTADKEILQLICGSDERYQEAFGVSLEEAAKEKTFTRRQALEWIGARVSPNQAKDDSG
SNQKLTPSDIAQQALAAMVLGHVPVRNMNFRPKCIYLATMTRRVLMAMIDDHMVDDRDYV
GNKRLELAGQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGPFDAGTLIRQGGDPITQA
FVRSISTGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISSQFEKTRKVSGPRALQPS
QWGMLCPSDTPEGEACGLVKNLALMTHITTDVPEAPLVKMAFMLGVEDISLVTGNELYRP
GVHMVQVNGTLIGVTNMAKKFVRQFRKLRRAGRMSEFVSIFINHHHKIIYIASDGGRICR
PMIIVEKGRSRVTTEHVRLLKEGKVTFDHFLRAGLVEYLDVNEENDAFIACYENEIEEGT
THLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQLNRIDTLLYLMTY
PQQPMVKTKTIELIGYNKLPAGQNATVAVMSYSGYDIEDALILNRASVDRGFGRCHVLKK
VTTPMRTFHNGSHERTAYPDPPPRPDAYTFVDKADGMTAPGATINQYDVMIHRETPIDTR
GGGADTQLYKPMPVTHKTPEPILVDKVMLTEGEDGALIKILTRQTRRPELGDKFSSRHGQ
KGVCGLIVPQADMPFNDQGIVPDIIMNPHGFPSRMTVGKMIELLSGKAGVIAGKLQYGTA
FGGSKVVDMSQILIDNGFSYGGKDMLTSGITGQPMEAYVYFGPIYYQKLKHMVMDKMHAR
PTGPRANLTRQPTEGRSKDGGLRLGEMERDCLIGYGATQLLLERLMISSDAFETQVCESC
GMLGYNNWCPKCKSGNGVVGLTIPYAAKLLIQELMGMNIMPKLCLEDTV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcaatatggagataaaaagggcgctgattggtattccaagggtgtgaagact
gtcgaagataaatggcagcttctcccagccttcctcaaagtaaaaggtcttgtcaagcag
catcttgactcctttaattactttgtcaatgtcgacatcaaagctattcttgccgccaac
tcccttgtcatttcagatatcaaccccaagtattacatccggtataccgacatccgtgta
gggcgtccagcacggcatgatgctaatcaagtagcttctgctctatcaccgatggaatgt
cgattaaccgactcgacatatagtgccccgatctatgtggatgtggaatacatgggagag
gagaagagaagcaagcagagaggtgtgcagatcggcatgttgccagtgatgttaaggagt
gatttgtgtaacctcaaggggaagaatgaagcggagttagcgagaatgggggagtgtccg
atggatccgggaggatatttcgttgtcaagggaacggaaaaggtcatattggtgcaagaa
cagttgagcaagaatcgtatcttggtaatgaaagacaaaaaggacgaggtgatggctgaa
gttacatcctcaacacatgatcgagttgtcaaaacttatgtcgtcagtaaagccaaccgt
ctctatctccgacacaattctttcaaagaattcatccctattgtcatcgccctcaaggct
atgggtcttactgccgacaaggaaatcctccaactcatctgtggttccgacgagcgatat
caggaagcctttggtgtttccctcgaagaagcagccaaggagaagacttttacccgccgt
caagcactcgaatggattggtgccagagtatctcccaaccaggcaaaggatgacagcgga
tccaaccaaaagcttactccaagcgatatcgcccaacaggctctcgctgcaatggttctt
ggccatgttcctgtgcgaaacatgaacttccgacccaagtgcatctacctcgccaccatg
acgcgaagggttctcatggccatgattgacgaccatatggttgatgatcgagattatgtt
ggtaacaagcgtctagaacttgccggtcagcttttgtctttgctctttgaagattctttc
aaaacgttcaacagtgagcttaaaaagcgaatggacaaaattctggaaaagcccaaccgt
gccggtcccttcgatgcggggaccctgattcgtcaaggtggtgatccgatcactcaggcg
tttgtccgttccatctccaccggcaactggtcgctcaagcgattccacgtagagcgtgca
ggtgtcacccacgtcttgtcccgtttatccttcattgccgcattgggtatgatgactcgt
atctcttcccaattcgaaaagacacgtaaagtctctggtcctcgtgctcttcaaccaagt
cagtggggtatgctctgtccatccgatacgcctgaaggtgaagcgtgtggtcttgtcaag
aacttggctcttatgactcacattactaccgacgttcctgaagctcccttggttaagatg
gccttcatgcttggtgttgaggatatctcccttgttacaggtaacgaactctaccggcca
ggagtgcacatggtgcaggtgaatggtacgctcatcggtgtgacgaacatggcgaagaaa
tttgtgaggcagttcagaaagttaaggcgagcggggaggatgtcagagtttgtttcgatc
tttattaaccaccaccacaagatcatatacattgcaagtgatggtggaagaatttgtcga
ccgatgattattgttgagaaggggagatcacgggtaacaacggagcatgtgaggcttttg
aaagagggcaaggtcactttcgaccatttcctccgcgcaggtttggtggaatacctcgat
gtcaacgaggagaatgacgctttcatcgcatgttacgaaaatgagatcgaagaaggaaca
acgcatctagaaatcgagccgtttaccattctcggtgctgtcgctggtttgattccttac
cctcaccacaaccagtctcctcgaaacacttatcaatgtgcgatgggtaaacaagctatt
ggcgccatcgcatacaaccagcttaaccgtattgacactttgctgtatctcatgacatac
cctcaacagcccatggtcaaaaccaagacgatcgagctgatcggctataacaaactaccc
gccggtcagaatgccacggtcgctgtcatgtcctactctggatacgacatcgaagatgct
ttaattctcaatcgtgcgagcgtagaccgaggttttggtcgatgtcacgttctcaagaag
gtgacaacgccaatgcgaacattccataatggttcacatgaacgtaccgcttaccccgac
cctcctcctcgacccgacgcatatacttttgtcgataaggccgatggaatgaccgcgccc
ggtgctactattaaccaatatgacgtgatgatccaccgagaaacccctatcgatactcgt
ggtggtggtgcagatacgcaattgtacaagccaatgcctgtcacccacaagactcctgaa
ccgatcttagtcgacaaggtgatgttaacagaaggcgaggatggcgcgttgatcaagatc
ttgacgaggcaaactcgaagaccagaactgggcgacaagttttcttcgcgacatggtcaa
aaaggtgtttgtggtttgatcgtgccccaggcagatatgccgttcaatgatcaaggtatt
gtacctgatattatcatgaatcctcacggtttcccctctcgaatgactgttggaaaaatg
attgagctcctttctggtaaagccggtgtcatcgccggtaaactccaatacggtactgca
tttggtggttccaaggtcgtcgacatgtcgcagatccttatcgacaacggtttctcgtat
gggggtaaggatatgttaaccagcggtatcaccggtcagccaatggaggcctacgtctac
tttggacctatctattatcagaagcttaagcacatggtcatggacaaaatgcatgctcga
cctactggccctagggctaatcttactcgtcagcctactgaaggtcgttcgaaggacggt
ggtcttcgtctaggtgaaatggagcgtgattgtttgattggttatggtgccactcagctt
ttattggaacgtcttatgatctcctctgatgcgtttgagacacaagtctgtgagagctgt
ggtatgttaggatacaataactggtgtcccaaatgtaagagtggtaatggggttgtggga
ttgaccattccttatgcggccaaactgttgatccaggaactaatggggatgaacatcatg
cccaagctttgtttggaagatactgtctag
DBGET
integrated database retrieval system
