KEGG   Cryptococcus gattii: CGB_H1660W
Entry
CGB_H1660W        CDS       T02232                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12828  splicing factor 3B subunit 1
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_H1660W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_H1660W
   03036 Chromosome and associated proteins [BR:cgi03036]
    CGB_H1660W
Spliceosome [BR:cgi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CGB_H1660W
 Complex B
    CGB_H1660W
 Complex C
   U2 SnRNP specific factors
    CGB_H1660W
Chromosome and associated proteins [BR:cgi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CGB_H1660W
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N SF3b1 HEAT_EZ HEAT_EF3_N HEAT_2 Vac14_Fab1_bd HEAT HEAT_ECM29 Adaptin_N Htt_N-HEAT_1 XMAP215_CLASP_TOG RRP12_HEAT MMS19_C
Other DBs
NCBI-GeneID: 10189443
NCBI-ProteinID: XP_003195616
UniProt: E6RAK0
LinkDB
Position
H:join(381036..383548,383600..383673,383727..384026,384076..384534,384587..384705)
AA seq 1154 aa
MSDEEYPQLQSYTAPQEILDEHAELADEDDTPDAFQDKAKSKQVAARQNDYHLRRFNRTD
GQGVGEDESYEERMRRINLEKEEEKVRRYKEKMEKEEKERGEMQVDDKTPPRELIGDETP
PRKALIGDETPPRAQAGDATPPRKKRRWDSEPEITQEVKEEVKEEVKEEEPKKRRSRWDQ
TPAEAPPEKKRSRWDQTPAQTASSSVLAAPTNLAKPSGIVLVEDKRYRRMTDEELDSLLP
GSEEGYAVVPVPHDYHPAPSVRKMVPQQAEAGFMMQDETDAARARAAAGGLQGTTEQTEI
DGIGTLQFLKPEDTQYFAKVLGEGGGEENDAEYTLEELKERKIMRLLLKIKNGTPPVRKT
ALRQITDRAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKI
LVVIEPLLIDEDYYARVEGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSV
VASALGIPALLPFLRAVCRSKKSWQARHTGIRIIQQIAIMSGCAVLPHLRNLVDAIADGL
KDEQQKVRTMTALALAGLAEAAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYII
PLMDPEYAGYYVRECMPILIREFQTSDEEMRRIVLQVIKQCASTEGVTPSYIKEEVLPEF
FKAFWVRRMALDKRNYKQLVETTVELANKAGVAEIVGRTVNDLKDESEPFRKMVMETITK
VVSNIGAADIDERLEVLLIDGIIYSFQEQTFEDTVMLDGFATVVASLGPRVKPYLPQIVS
MILWRLTNKSAKVRMLAADLTTKLAPIIKSCKEDVLLSKLGVVIFEQLGEEYPDALGSLI
AAEGAIANVVGMTEMNPPVKDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEYVPAKE
WMRICFELLDLLKAHKRAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVCSTV
AIAIVAETCGPFTCIPAILNEYRTPELNVRNGCLKALAFVFEYVGEMSKDYIHSVVGLLE
DALTDRDHVHRQTACAIVKHLAIGVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAI
EAMRLGIGSGVVLSYVLQGLFHPARRVREVYWRMYNTLILGSSDAMVPFYPALGSESDLA
SGQDYTRHQLMMWI
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgtccgacgaagagtacccacagctccagtcatacacggcaccccaggaaattctggac
gagcacgccgagctcgcagatgaggacgacacgcctgatgccttccaggacaaggcaaag
tcaaagcaagtggctgctagacaaaacgactaccacttgcgtaggttcaacaggacggat
ggacagggtgtaggtgaggatgaaagctatgaggaacgcatgaggagaatcaatttggag
aaggaggaggaaaaggtgaggagatacaaggaaaagatggagaaggaggagaaggagaga
ggagaaatgcaagtggacgacaagaccccgccgagagaactcataggtgatgaaaccccc
ccacgcaaggcccttattggggatgagacgcctcccagagctcaggctggtgacgctact
cctccccgcaagaagcgaagatgggattccgagcccgagattacgcaagaagttaaggaa
gaggtcaaggaggaggtcaaggaagaagagcccaagaaacgtcgctctcgatgggatcag
accccagccgaagcaccaccagagaaaaagcgttcccgatgggatcaaacccctgcgcag
actgcctcctccagtgttctcgctgctccaactaacctcgccaaaccttccggtattgtc
ctggtcgaagacaaacgataccgtcgcatgacagatgaagagctcgactcattgcttcct
ggctcagaagaaggttatgctgtggtccctgtaccgcacgactaccaccccgccccttct
gttcgcaagatggttccccaacaggctgaagctggattcatgatgcaggacgagacggat
gccgcacgagcgcgcgcagctgctggtggtctgcagggtacaactgagcaaacagaaatt
gatggcattggaactctccaattcctcaaacccgaggatacccagtactttgcaaaggta
ctcggcgaaggcggtggtgaagaaaacgacgcggaatacactcttgaagagctcaaagaa
cgaaagatcatgcgacttctgctcaaaataaaaaatggtacccctcccgtccgtaaaaca
gctttgcgtcaaatcaccgatcgcgcgcgagagtttggcgcaggtccattatttgacaaa
attctccctcttcttatggagcgtacgctcgaagatcaagaacggcatttgcttgttaag
gtcatcgaccgtgtcctctacaagcttgacgacctcgttcgtccatatgtccacaagatc
ctcgtcgttatcgagcctcttcttatcgatgaggattactacgctcgagtcgaaggtcga
gaaatcatttccaacctcgccaaggcggccggtctcgcccacatgatctccaccatgcgt
cccgatatcgaccacgttgatgaatacgttcgtaacaccactgccagagccttttcggtt
gtagcctccgccctcggtatccctgctcttcttcctttccttcgtgccgtctgtcgatca
aaaaaatcatggcaagcgagacataccggtatccgtattatccaacaaatcgccatcatg
tcaggctgcgctgtccttcctcatcttcgtaatctcgtcgacgccattgccgatggtttg
aaagatgagcaacaaaaagttcgaactatgaccgctctcgcccttgctggtcttgccgag
gctgccgcgccatacggtatagagtcttttgacaatgttctcaagcccttgtggctcggt
atcaggcagcaccgtggtaagaccctcgccgccttcctcaaggccatcggttacatcatc
cctcttatggaccccgagtacgccggatactatgtacgagagtgtatgcccattttgatc
cgagaattccagacctccgatgaagaaatgagaaggattgtcttgcaagtcatcaagcag
tgtgcctctactgagggtgttactccttcatacatcaaagaagaggttcttcccgaattc
tttaaggcgttctgggtcaggcgtatggcgttagacaagaggaattataagcagcttgta
gagaccaccgtcgagcttgccaacaaggctggtgtcgcagagatcgtcggcaggacagtc
aatgacttgaaggacgaaagtgaacctttcagaaagatggttatggagactatcaccaag
gtggtttccaacattggtgctgccgatattgacgaacgtctcgaagtcttgttgattgat
ggtattatctactccttccaggagcagacttttgaagacactgtcatgcttgacggtttc
gccaccgttgtcgcctctcttggtcctcgtgtcaagccttacctcccacaaatcgtctcc
atgatcctttggagattaactaacaagtctgccaaggtgcgaatgttggccgctgatctt
accaccaagttggcaccaattatcaaaagctgtaaggaggatgttttgttgagcaagtta
ggcgttgttatcttcgagcagttgggtgaagagtatcccgacgctttgggaagtcttatc
gccgctgagggagctatcgcgaacgtggtcggtatgacagagatgaacccacccgtcaag
gatctcctccctcgaatgacccctattcttcgaaaccgacacgaaaaggtccaagaagca
actatcaacttgatcggtcgtattgcggatcgaggtgccgaatacgtccctgccaaggaa
tggatgcgaatttgttttgagcttctcgacctgctgaaggcccacaagcgagcgattcga
cgagcggctgtcaactcgtttggttatatcgcaaaggctattggtcctcaggatgtattg
agtgtcctattgacaaacttgaaggtgcaggagcgacagagtagggtttgtagtactgtc
gctattgccattgtcgccgaaacatgtggtcccttcacttgtatccccgctatccttaac
gaataccgaactcctgaactcaacgttcgaaacggttgtctcaaggctcttgctttcgtt
ttcgaatacgtcggcgaaatgtctaaagattatattcactcagtcgttggcttactcgaa
gatgccctcactgaccgagatcacgtccaccgacaaacggcctgtgccattgtcaagcac
ttggctattggtgtcgccggcttgggttatgaggaggcactcacacatttgttaaacctt
gtttggccaaacatctttgaaacgagccctcacgttattggcggtgtgatggatgctatt
gaagcgatgagacttggcattggatctggtgtcgtgttgagttacgtgctgcaagggtta
ttccaccctgccagacgagtaagggaagtttattggagaatgtacaacactttgatcctt
ggatcatcggatgcaatggtgcctttctaccctgctctgggttcagaatccgatttggcg
tctggacaggactacacaaggcatcagctcatgatgtggatctag

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