KEGG   Cryptococcus gattii: CGB_I1330W
Entry
CGB_I1330W        CDS       T02232                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_I1330W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_I1330W
Spliceosome [BR:cgi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CGB_I1330W
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML PRP4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_like Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 10186246
NCBI-ProteinID: XP_003196056
UniProt: E6RBW0
LinkDB
Position
I:join(294124..294142,294183..294367,294431..294544,294612..294779,294850..295127,295183..295395,295494..295601,295696..296149)
AA seq 512 aa
MDLDDLITDNTYQLGGADDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQAKGEGGMIVDESEESSDEEEEGEFYTEGSDDLLEA
RRKIARYSLSKARARIARQRREYSVPLGKLVNARKELFKELKSFNNFGSQFGDDRPLSTI
RFSPSSQYILTTSWTGDTKLWDLPNLNPISTKRGHTDKVGGAAWHPFATVGASEEAVNFA
TGGGEGDVKLWSLSGEKPLSTLSGHTSRVGRLAFHPSGAYLASAGFDGTWRLWDVESSKE
LMIQEGHSKEVYALGCQDDGALIASGGFDAIGRVWDLRTGRTAMVLDGHVKEILAMDFAP
NGYQIATGSGDDTVRIWDLRALKTQFIIPAHKSSVADVKFFRSSSELPPVGIQGLPLSSR
SAHVDGGMDVDKSNDTEDKEKEERLSRSGMFLVTAGFDCNVRIWSADEWNMVRNLSTDAG
KVMSVDVSGDGKFVASASYSRSFHLFGGENSL
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggacttggacgacctcatcacggacaacacataccagctcggcggcgccgacgacgag
cgagaacgagcacagaatgccgccatcatagaagagctcgaacgcaagaagaggttgcgc
aagcttgcagtccccacagacgacaaaaaggtcagggagaggctcagggcgtatggagag
cccatcaccctctttggcgaaggacccggagacagacgagatcgattaaagtatgtgcag
gagcaaattgagcaggcgaaaggggagggcgggatgatcgtggacgaatcggaagagagt
agcgatgaagaagaagagggtgaattctacactgaaggctcagacgatttactcgaagcg
cgtcgaaagattgcgagatattctttatcaaaagccagagcaagaatagctcgtcagaga
agagaatacagtgtacccctcggaaaactcgtcaatgctcgcaaggaattattcaaagag
ctcaaatcattcaacaactttggctcccaatttggggatgaccgtcccttatccaccatc
cgcttttccccatcctcccaatacatccttacgacatcttggaccggcgatacgaaactt
tgggatctaccgaacctcaatcccatctccacgaaaaggggacacacggacaaggttgga
ggagctgcttggcatccgtttgcgacagtaggagccagtgaagaagctgtcaattttgcg
accggaggcggcgagggagatgtaaaactttggtctctgtctggtgaaaaacctctatcg
accctttcaggccacacatcacgagtcggtcgacttgcttttcatccctctggagcctac
ctcgcttccgcaggttttgacggtacatggcgtctctgggacgtcgagtcaagtaaagag
ttgatgatacaagaaggtcatagtaaagaggtgtacgctttgggctgccaggacgacggg
gcgttgattgcttcaggaggatttgatgcgattgggagagtatgggatttgagaacaggt
cgaactgcgatggttctggatggtcatgtcaaggaaattcttgctatggactttgctccc
aacgggtatcaaatagcaacaggatcaggcgacgataccgtccgtatatgggatctacgt
gcactcaagacacaattcatcatccccgcacacaagtctagtgtcgccgacgtcaaattc
ttcaggtcttctagcgaattgccgccagtcggcatccagggactgccgctctcgtcccgc
tcggcacatgttgacggcggcatggacgtggacaagagcaacgatacagaagataaagaa
aaggaagaaaggctcagtcgttccggcatgttcctcgtcacagccggatttgactgcaac
gtccgtatctggtcagcagacgagtggaatatggtgcgcaacttgtcgacggatgcggga
aaggtgatgagtgtggatgtctcgggagatggtaaattcgtggcgagtgcaagctatagt
cgatcgttccatctgtttgggggggagaactctttgtag

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