Cryptococcus gattii: CGB_I1330W
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Entry
CGB_I1330W CDS
T02232
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cgi
Cryptococcus gattii
Pathway
cgi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CGB_I1330W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgi03041
]
CGB_I1330W
Spliceosome [BR:
cgi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CGB_I1330W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_like
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
10186246
NCBI-ProteinID:
XP_003196056
UniProt:
E6RBW0
LinkDB
All DBs
Position
I:join(294124..294142,294183..294367,294431..294544,294612..294779,294850..295127,295183..295395,295494..295601,295696..296149)
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AA seq
512 aa
AA seq
DB search
MDLDDLITDNTYQLGGADDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQAKGEGGMIVDESEESSDEEEEGEFYTEGSDDLLEA
RRKIARYSLSKARARIARQRREYSVPLGKLVNARKELFKELKSFNNFGSQFGDDRPLSTI
RFSPSSQYILTTSWTGDTKLWDLPNLNPISTKRGHTDKVGGAAWHPFATVGASEEAVNFA
TGGGEGDVKLWSLSGEKPLSTLSGHTSRVGRLAFHPSGAYLASAGFDGTWRLWDVESSKE
LMIQEGHSKEVYALGCQDDGALIASGGFDAIGRVWDLRTGRTAMVLDGHVKEILAMDFAP
NGYQIATGSGDDTVRIWDLRALKTQFIIPAHKSSVADVKFFRSSSELPPVGIQGLPLSSR
SAHVDGGMDVDKSNDTEDKEKEERLSRSGMFLVTAGFDCNVRIWSADEWNMVRNLSTDAG
KVMSVDVSGDGKFVASASYSRSFHLFGGENSL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacttggacgacctcatcacggacaacacataccagctcggcggcgccgacgacgag
cgagaacgagcacagaatgccgccatcatagaagagctcgaacgcaagaagaggttgcgc
aagcttgcagtccccacagacgacaaaaaggtcagggagaggctcagggcgtatggagag
cccatcaccctctttggcgaaggacccggagacagacgagatcgattaaagtatgtgcag
gagcaaattgagcaggcgaaaggggagggcgggatgatcgtggacgaatcggaagagagt
agcgatgaagaagaagagggtgaattctacactgaaggctcagacgatttactcgaagcg
cgtcgaaagattgcgagatattctttatcaaaagccagagcaagaatagctcgtcagaga
agagaatacagtgtacccctcggaaaactcgtcaatgctcgcaaggaattattcaaagag
ctcaaatcattcaacaactttggctcccaatttggggatgaccgtcccttatccaccatc
cgcttttccccatcctcccaatacatccttacgacatcttggaccggcgatacgaaactt
tgggatctaccgaacctcaatcccatctccacgaaaaggggacacacggacaaggttgga
ggagctgcttggcatccgtttgcgacagtaggagccagtgaagaagctgtcaattttgcg
accggaggcggcgagggagatgtaaaactttggtctctgtctggtgaaaaacctctatcg
accctttcaggccacacatcacgagtcggtcgacttgcttttcatccctctggagcctac
ctcgcttccgcaggttttgacggtacatggcgtctctgggacgtcgagtcaagtaaagag
ttgatgatacaagaaggtcatagtaaagaggtgtacgctttgggctgccaggacgacggg
gcgttgattgcttcaggaggatttgatgcgattgggagagtatgggatttgagaacaggt
cgaactgcgatggttctggatggtcatgtcaaggaaattcttgctatggactttgctccc
aacgggtatcaaatagcaacaggatcaggcgacgataccgtccgtatatgggatctacgt
gcactcaagacacaattcatcatccccgcacacaagtctagtgtcgccgacgtcaaattc
ttcaggtcttctagcgaattgccgccagtcggcatccagggactgccgctctcgtcccgc
tcggcacatgttgacggcggcatggacgtggacaagagcaacgatacagaagataaagaa
aaggaagaaaggctcagtcgttccggcatgttcctcgtcacagccggatttgactgcaac
gtccgtatctggtcagcagacgagtggaatatggtgcgcaacttgtcgacggatgcggga
aaggtgatgagtgtggatgtctcgggagatggtaaattcgtggcgagtgcaagctatagt
cgatcgttccatctgtttgggggggagaactctttgtag
DBGET
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