Cryptococcus gattii: CGB_I1400C
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Entry
CGB_I1400C CDS
T02232
Name
(RefSeq) conserved hypothetical WD repeat protein
KO
K14855
ribosome assembly protein 4
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_I1400C
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CGB_I1400C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
DSE1_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
ASA1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
NLE
Beta-prop_Nup120_160
Beta-prop_HPS5
eIF2A
Beta-prop_NOL10_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WDR54
Tricorn_N
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
PAC11
Beta-prop_SPT8
Ge1_WD40
MG_like
Beta-prop_ACSF4
WD_LRWD1
WD40_RFWD3
Beta-prop_ELP1_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
10186242
NCBI-ProteinID:
XP_003196090
UniProt:
E6RBW7
LinkDB
All DBs
Position
I:complement(join(310788..310800,310857..310978,311029..311399,311451..311577,311635..312137,312189..312411,312458..312670))
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AA seq
523 aa
AA seq
DB search
MATQLPPPKRQRSAYAQSQMPKVEEPAKDVPSIVVQFKSAEDGSSLGPAINLPADTARDA
LQMLVNKLRGEAEDPLPYAFHLVPKVPSTSTTPASARVQINNSIQSDALEVKNSTFSPED
VFELWCEPQAVFRVRSVGRCSATLTGHSSPILCCAQSPTGRYAATGSGDASCRVWDMETE
TPKWTLSGHKGWVLCVEWDSREKILATGGHDGQVRLWNPATGQPYGAPLLGHTKWVTALA
FEPLHLVPKSSSGPRIASASKDGTVRVWNTSTRKLEFVLTGHAASVNCLRWGGENVIYTG
SSDRTVKIWSGVDGKLIRTLSEHAHWVNTMALSTDFVLRTGPFDHTGKIPTSDEEVKKRA
EERYKSVTSNQPETLITGSDDHTLYLWPDQASSSFSSTATPKKPLARLTGHQKQVNHVAF
SPDGRMIASAGFDNAVKLWEGRTGKFIASLRGHVAAVYRVAWSADSRMLVSASKDTTLKL
WNLKTYKIRVDLPGHTDEVYCVDFVADKVVSGGRDKTVKIWRN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctactcaacttcccccgccaaagcggcagaggtcggcctacgcgcagtcccaaatg
cccaaggtggaagaaccggcgaaagacgttccctcgattgtggtccagttcaaatctgca
gaagatggatccagtcttggtcctgcgattaacttgcctgccgataccgccagggatgct
ttacagatgcttgtaaacaagcttaggggagaagctgaagatcctctgccgtacgccttc
cacctcgttcctaaagtaccttcaacttcgacgactccggcatctgctcgagtgcaaatc
aataactctattcaatctgatgcccttgaagtgaaaaatagtactttttccccggaagat
gtgtttgaactatggtgtgagccgcaagcggtgttcagggttagaagtgtggggaggtgc
agtgctacattgactggccactcatctccgatcctttgttgtgcacagtctcctactggt
agatatgctgctacaggctcgggagacgctagctgccgggtgtgggacatggagaccgaa
acccccaaatggactctgtcgggccacaagggttgggttctgtgcgttgaatgggatagc
cgggaaaagatccttgctactggtggacatgacggacaagttaggctctggaatccagcc
acaggccaaccttatggtgcgccccttttgggtcataccaaatgggtcactgcgctggct
ttcgagcctcttcatctcgtccctaagagctcgtctgggccccgtattgcctctgcttca
aaagacggcactgtccgagtctggaatacctccaccagaaagttggaattcgtacttacc
ggccatgctgcgagtgtcaactgcttaagatggggaggtgagaatgtcatatacacagga
agcagtgacagaactgtcaagatttggagtggcgttgatggaaagcttatcaggacactg
tctgaacatgcccattgggttaatactatggcgctcagcacagatttcgtcttgaggact
ggtccattcgaccacactggtaaaatccctaccagcgatgaagaagtcaaaaagcgcgcg
gaggagcgatacaaatctgttacctccaaccagcccgagacgctcattactggttccgat
gatcacaccctttatctttggcccgaccaggcttcctcgtccttctcatctactgctact
cccaagaaacctctcgctcggctgacggggcatcagaaacaagtcaatcatgttgcattc
tcccctgacggccgaatgattgccagtgccggttttgacaacgctgtcaagctctgggaa
ggaaggacagggaaatttattgcaagtcttagaggacatgtggcagcagtgtacagggtt
gcttggtcggcggactcaaggatgttggttagtgcaagcaaggatacaacgctcaaattg
tggaacctcaaaacttacaaaatccgtgttgatcttcccggccatactgacgaagtatac
tgtgtggactttgttgccgacaaagtcgtcagtggtggcagagataagactgtgaaaatt
tggaggaattaa
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