Cryptococcus gattii: CGB_I1590W
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Entry
CGB_I1590W CDS
T02232
Name
(RefSeq) non-translatable mRNA -binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_I1590W
03041 Spliceosome [BR:
cgi03041
]
CGB_I1590W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CGB_I1590W
Spliceosome [BR:
cgi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CGB_I1590W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
10186231
NCBI-ProteinID:
XP_003196067
UniProt:
E6RBY6
LinkDB
All DBs
Position
I:join(359189..359673,359735..360284,360350..360578,360649..360689)
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AA seq
434 aa
AA seq
DB search
MAAPFVQYGITPGQSAEAPKRPHLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQ
HGGFNYGFVEYADMRSAEQALTTLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDL
SPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLG
SRAIRVNWANQKTQTGGTRTGGGTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGG
AVGSFETVASQTPEFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLD
THQNAALAITHLQNQLVHGRPIKCSWGKDKGSMEGGAPAAGYPPMQPQLGYPNYNYYGGY
NYNQAGVPGQPGQPGVAVASHAAPAVGAVGAVGAEGQAQQGSWDPAAAAAYYQAGGWGGY
YTQQQDAQQPSAHQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccattcgtccaatacggcatcaccccaggtcaatccgccgaagctcccaaa
cgaccccatctttatgtcggcaacctttcgcctcgggtcaccgactacatcctcacggaa
atttttgctgtcgctggtcccgtcgtcagcgcaaaaattattcaagaccgaaatttccag
cacggtggattcaactatggtttcgtcgagtacgccgacatgcgctctgccgagcaggcg
ctcaccacactcaacggccgcaagatctttgacgccgagattagggtcaattgggcgtac
cagggtaaccagaacaaggaggacacccagcaccattaccacgtctttgttggcgacctg
agtccagaagtgaacgacgatgtcttgtcaaaggcgtttggtgcctttggtagtctgagc
gaggcgagggttatgtgggatatgaactctggcaagagtaggggctatggattcctctcc
ttccgtgacaaggccgatgctgagcaagcaattgcttccatgaacggcgaatggcttggt
tctcgtgctattcgtgttaactgggcaaaccagaagacccagacaggcggcacccgaacc
ggtggcggtacgccctcctactcggctccccctatgggcgctcctcccgttcccgctggt
gtcccttctgcttacggtgccgccgctcctggggttgttccaggcgtcggcgtcggtggt
gccgtcggctcatttgagactgttgcttcccaaacacccgagttcaacactactgtctat
gtcggcaacctcattccctacaccacacaagccgatctcattcctcttttccagggctac
ggctatattgttgaaatccgcatgcaggccgacagaggctttgcgtttgtcaagctcgac
acccaccagaatgccgccttggccatcactcatttgcaaaaccagttggtgcatggaagg
cccatcaagtgttcttggggcaaggacaagggatcaatggaaggtggcgcacctgctgct
ggataccctcccatgcaacctcaactcggctaccccaactacaactactacggaggatac
aactataatcaggctggcgtccccggtcagccgggacagcctggcgtagctgtcgcgagc
cacgctgctcccgctgttggtgcagtcggagctgtcggagccgagggccaggctcagcaa
ggctcgtgggaccctgctgctgctgccgcgtactaccaggctggaggctggggtggttac
tacactcaacagcaagacgctcaacagccctccgcgcaccaataa
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