KEGG   Cryptococcus gattii: CGB_I3370C
Entry
CGB_I3370C        CDS       T02232                                 
Name
(RefSeq) poly(A)-specific ribonuclease
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_I3370C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_I3370C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CGB_I3370C
  mRNA degradation factors
   3'-5' decay
    Pan complex
     CGB_I3370C
SSDB
Motif
Pfam: Pan3_PK Pkinase PK_Tyr_Ser-Thr zf-CCCH
Other DBs
NCBI-GeneID: 10186434
NCBI-ProteinID: XP_003196236
UniProt: E6RCB3
LinkDB
Position
I:complement(join(696064..696106,696183..696289,696415..696553,696639..696737,696822..698296,698344..698364,698418..698442,698489..698528,698581..698686))
AA seq 684 aa
MLPPPKSAAVQIVRPPSPSSEKAKEKEKKSSPEKRDTPQRICRNVMIYGYCKYQDQGCIY
YHPPAGVDSSTSQNNSPATQAPTLSASTPLIGTPAREKPTLSIEHLAAPVFVPKGLDSSP
RVTTPNVPSPSAPTPPVWPSLPSTGLLPRQDVQVSTQPSHAQLSATASPMAYDDPSHIAL
SAAHTHAQAQALTHGMLDPHAHAPPVDQSMYLPPRQPLDYNLYAAPLPSIGGNPLYPTHP
HAFFVSDDLRRTIEAKQEAVYVGANGASAPGLPQELGVYHSLVPLPLPSATAQRLPTQSQ
PSKVYGLPSPVYRATSEVDGNTYCLRRVEGFKLVNQLAFASMDTWRRMRHPNIVGLKEAF
TTKTFGDHSLIMVYDYHPLSETLYDEYISPNPPEPSSAFALANRPPKRRSSPSERVLWSY
VTQIANALKAIHSSGLAVRNLDASKILLTGKNRIRLNGCGVWDVLAFDNKTPVQAFQQED
LLSFGKLIISLTCDFFQPTLPLSLPLDHISRHYSSDLSNLILYLISKPAQGKVKSIDEVI
KMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLMTKLGFINERAEFELDPRWSDTG
DRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCLVVSYR
EIKHCIEAAFNELKNAGNNHRVHR
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgctgcctccgcccaaatcagctgcggtgcagatcgtccgtccgccgtcgccctcctca
gaaaaggcgaaggagaaggagaagaagtcctcgcctgagaagcgcgacacgccccagagg
atatgccgcaatgtcatgatctatggatactgcaagtaccaggaccagggttgcatctac
tatcatccacctgctggggtagactcgtccacatcccagaacaacagcccagccacccaa
gcaccgacactctccgcctccacccccctcatcggtacaccagccagagagaaaccgacc
ttgagcatcgagcatctcgctgctcccgtattcgttccaaaaggtcttgactcctctccc
agagtaaccactccaaatgtaccgtctcccagcgctcctacgcctcccgtctggccgtcc
cttccctcaacaggacttttacctcgtcaggacgtccaggtatccacgcagcccagccat
gctcagttgagtgctacagcatccccgatggcatacgatgacccttcgcatatcgcgctc
tctgccgcccatactcacgctcaagctcaagcgttgacgcacggtatgcttgaccctcac
gcccatgcacctcctgtcgaccaaagcatgtatctcccacctcgccaaccgctagattac
aatctctacgcagcaccgcttcccagcatcggcgggaatccgctttacccaacccatcca
cacgcattctttgtgagcgatgatttgagaagaacaatcgaggcgaaacaggaggctgtt
tatgtaggcgcgaacggcgcttctgcacctgggctgccgcaagagctgggtgtatatcac
tctctcgttccacttcccctcccctctgctactgctcagcgcctccctacccaatcccaa
ccgtcaaaagtatacggcctaccttcccccgtctatcgcgcgacttctgaagtggacggt
aatacgtattgtttgagaagggtggaggggttcaagttggtcaaccagcttgcatttgcg
tcgatggatacgtggagacggatgaggcatccaaacattgttgggctaaaggaagctttt
acaacaaaaacctttggagatcactcgttaatcatggtgtatgattaccaccctctctct
gaaactctttacgacgaatacatctcacccaacccccccgagccatcctccgctttcgcc
ctcgccaatcgacctcccaaacgacgttcatcaccatccgaacgagttctctggtcctat
gtcacccaaatcgctaacgccctcaaggcaattcacagttccgggctcgcagtgcggaac
ctcgatgcgagcaagattttgttgactgggaagaacaggatcagattgaatggttgtgga
gtgtgggatgtgttggcgtttgataacaagacgcctgtccaggctttccagcaggaagat
ttgctctcttttgggaaactcatcatttccctcacttgcgactttttccaacctacactt
cctctttcccttccgctcgatcacatttcgagacattactcctccgatctcagcaatctc
atattgtacttgattagcaagccggcacaggggaaagtcaagagtatcgatgaagttatc
aagatgatgggacctaggatattaaacgagctggatgctgttcagagttatgcggatgtg
ttggagaatgagttgggggccgaagtggagaatggacgtatcgtgagactgatgaccaag
ctgggtttcatcaatgagcgagcagagtttgaattggacccacgttggtctgatacgggc
gatagatacatcctcaaacttttcagagactatgtcttccatagcgttggagtggatgga
aagccaattttggatcttagtcatgtgttggtttgtttgaacaagctggatgccggtttg
gacgaaagggtcatgctcgtctcaagggatgaccaaagttgtcttgtcgttagctacaga
gagattaagcattgtattgaggctgctttcaacgagttgaagaatgcaggtaataaccac
cgagtccaccgatag

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