Cryptococcus gattii: CGB_I3550C
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Entry
CGB_I3550C CDS
T02232
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_I3550C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_I3550C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CGB_I3550C
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Imm5_like
Motif
Other DBs
NCBI-GeneID:
10186443
NCBI-ProteinID:
XP_003196227
UniProt:
E6RCD1
LinkDB
All DBs
Position
I:complement(join(734890..734988,735046..735432,735505..735610,735673..735751,735833..735968))
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AA seq
268 aa
AA seq
DB search
MSTFDRRRIPAPEISVPPVYEPLADDAQAGPSTRTDRTDQESRPIFLKTGLISQAHGSGY
IEAGGVKIACSVYGPRPKPPPYSPQGTLNLEVKFAPFASDPRRAPLRDTEPLPLSNLLTQ
LLLPTLHLHLLPKSSIDVYLLVLESDTLTNVLSAGLTVASAAVADAGIEMAGLGVGGVVA
SLGADEKQGKKRVVIDPSLEEEKESDVKVMVGTMPALSKVTNVWLTGEIEVDEACNMIEQ
AFEASKQTHSVVAEALVEGAGERGIAAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttttgaccgtcgccgtatcccagcacccgaaatatctgtccctcctgtctat
gagccccttgctgacgatgctcaagcaggtccgtctacccggacagacagaactgaccaa
gagtcaagaccgatattcttaaagacaggattgatcagtcaggcgcatggtagcggatac
attgaagctgggggtgtcaagattgcttgctccgtatacggccccagacccaaacctccc
ccatactctcctcaaggtaccctcaaccttgaagtaaaatttgccccatttgcctcggac
cctcgccgtgcgccattacgcgataccgaaccacttcccttatctaatctcctaacccaa
cttctcctccctacacttcacctccacctcctcccgaaatcatccatcgacgtctaccta
ctcgtcctcgaatctgataccctcaccaatgtgctctctgcagggttgactgtcgcttct
gcagcagtggcggatgctggaatcgaaatggccggtttgggtgtgggaggagtggtagcg
agcctcggagctgatgagaaacaaggcaagaagcgggtggtgattgacccgagtttggag
gaggagaaggaaagtgatgtcaaggttatggttgggacgatgccagcgttgagcaaggtg
acgaatgtatggttgactggagagatcgaagtggatgaggcttgtaatatgattgagcag
gccttcgaggcgtctaaacaaacgcacagcgtcgtcgcggaggccttggttgaaggggcc
ggagaacggggtatagcagctgcatag
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integrated database retrieval system
