Cryptococcus gattii: CGB_I4200W
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Entry
CGB_I4200W CDS
T02232
Name
(RefSeq) histone deacetylase 1 (hd1)
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03082
ATP-dependent chromatin remodeling
cgi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CGB_I4200W
03083 Polycomb repressive complex
CGB_I4200W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_I4200W
Enzymes [BR:
cgi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CGB_I4200W
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CGB_I4200W
HDAC complexes
Sin3A-HDAC complex
CGB_I4200W
BRAF-HDAC complex
CGB_I4200W
REST complex
CGB_I4200W
SHIP complex
CGB_I4200W
MiDAC complex
CGB_I4200W
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CGB_I4200W
Heterochromatin formation proteins
Other heterochromatin formation proteins
CGB_I4200W
Chromatin remodeling factors
NuRD complex
CGB_I4200W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
10186573
NCBI-ProteinID:
XP_003196261
UniProt:
E6RCG5
LinkDB
All DBs
Position
I:join(856074..856418,856475..856592,856650..856724,856778..856889,856944..857112,857165..857257,857307..857415,857485..857560,857612..857695,857751..857840,857905..858053,858157..858605)
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AA seq
622 aa
AA seq
DB search
MGPAQPPIDPSPPPSSSSSRRVAYYYDQDVGNYNYYLGHPMKPHRIRMAHNLIVNYGMCD
EEGQEHGPAEVWGEGKRMVNDEMAQNWGGGLMGEAEMKWEKAALSGSRSKMMQVFKPRRA
TKEEMTRFHTDEYIDLLEAVTPETADALTGGGTRCLIGEDCPAFDGLFEFCTISAGGSLG
AAERLNAGAADIVINWAGGLHHAKKTEASGFCYVNDIVLGILELLRIHPRVLYIDVDVHH
GDGVEEAFYVTDRVMTCSFHRFGEFFPGTGDVRDVGMKKGKGYAVNVPLRDGITDETFQS
IFKPVIDRIMSHFRPSAVVLQMGADSISGDKLGGFNLTLEGHAECARFIKGFNVPVMMVG
GGGYTVKNVARAWTKETAIMCGVDLPEDLPYNQFLEYYGPRYKLEVLPTNAVDHNPPEYL
ERIKNQVFENLRNLPFAPSAQMRSVPSKTIGQVLGITDGGDEEPEDEIDQRIKKLLKRRR
ANALDGDVSSSSESEIDTPAFSRPGRARRQGGNFSGRGRSSRLAQLQHNRERREAAQEAS
NGMEDDPCGVLGKKKRSFFKVVPKLNGVGVEPVDTSAVGFGIGVVNGGFNGVGLKERLGI
PVVEQWKGNGVMSRAGTPASMA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgcccagccaccgatagacccttccccacctccatcttcttcctcctcacgc
agggtcgcatactattacgatcaggatgtgggcaactataactactatctcggccatccc
atgaagccccaccgaataaggatggctcacaatttgattgtcaactacgggatgtgtgat
gaggaagggcaggagcatggccctgccgaagtatggggcgaaggaaagaggatggtgaat
gacgagatggcccaaaattggggaggaggcctgatgggtgaggcagagatgaagtgggaa
aaggcggcgttgagtggatcaaggagtaagatgatgcaggtttttaaacctcgaagggct
accaaagaagaaatgactcggtttcacacggatgaatatatagatctgctagaggctgtt
accccggagactgcggatgctttaacaggcggcggaacgaggtgcctcattggtgaggac
tgtcccgcgttcgacgggctattcgagttttgcaccatctctgcaggtggatcattaggt
gctgctgaacgtctgaacgccggtgcagctgacatcgtaatcaactgggctggtggtctg
catcacgccaagaagactgaagcaagtggtttctgctacgtgaatgacattgtcctgggt
atcctcgagcttcttcgaatacatccccgggttctttacattgatgtggacgtacaccac
ggagacggtgtggaggaagcgttctacgtaacggatagggtcatgacttgtagcttccac
cgatttggagaattcttccccggtacaggtgatgtcagggatgttggtatgaagaaagga
aaaggctacgccgtgaacgtcccgctccgagacggtatcaccgatgagactttccaatca
atattcaagccggtgattgaccgtatcatgtcacacttccgacccagcgctgtagtcctt
caaatgggtgccgattctatatcaggcgacaaactcggtggctttaatctaactttggaa
ggtcacgcggagtgtgcgagattcatcaagggcttcaacgtacctgttatgatggtcggt
gggggcggatatactgttaaaaatgttgcaagggcttggactaaggagactgcaatcatg
tgcggcgtggatcttcctgaggacttgccttacaatcaattcttggaatactacggaccc
cgatataagcttgaagttttgcccaccaatgccgtagatcataatccccccgagtacttg
gagcgtattaagaatcaagtgtttgagaacctccgaaatcttccatttgctccttccgct
caaatgcgttctgtcccaagcaagactattggccaggttttgggtataacggatggcggt
gatgaggaacccgaagatgagattgatcagcgtataaagaaattgctgaaacgtcgccga
gccaatgccctagacggtgacgtctcttcgtcttccgaatccgaaatcgacactccggcc
ttctcccgtcccggacgagccagacgtcaaggtggcaatttctccggccgtggtcgctca
tcccgtcttgctcaactacaacataaccgcgaaaggagagaagcagcacaggaagcgtcc
aacggaatggaagatgatccttgcggtgtattgggaaagaagaagaggagtttcttcaag
gtggtccccaagttgaatggtgtgggggttgagccagtagacacgagtgctgtgggtttt
gggattggggtggtgaatggtggattcaatggtgtaggactgaaggagaggttggggata
ccggtagtagagcagtggaaaggaaatggggtcatgtcgagagctggaacgccagcaagt
atggcgtga
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