KEGG   Cryptococcus gattii: CGB_J1480W
Entry
CGB_J1480W        CDS       T02232                                 
Name
(RefSeq) nucleolar exosome component, involved in rRNA processing and RNA degradation; Dis3p
  KO
K12585  exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_J1480W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_J1480W
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     CGB_J1480W
SSDB
Motif
Pfam: RNB Rrp44_CSD1 Rrp44_S1 PIN_4 OB_Dis3 CSD2 OB_HELZ2 OB_RNB
Other DBs
NCBI-GeneID: 10184957
NCBI-ProteinID: XP_003196405
UniProt: E6RCT5
LinkDB
Position
J:join(300698..300812,300854..301029,301075..301970,302028..302518,302579..302757,302828..302934,303000..303393,303444..303590,303645..303934,304004..304217)
AA seq 1002 aa
MAAVKSHPPITILKRTREDQHLSQNKFLKKTVRGKVINIFRERYVRDDIPCGYQDCHQCS
QFPGYKPVLPRTGFLQHTKFAGNGHYLVIDTNIVLHQMDLLQSLPAQLPLIIPSTTIRET
RHRSLPLYNRLQQLIQDEDRLVWVWWNEERRETATVREVDEEHGREKINDRNDRAIRQTV
LFYADHLSQLTSNAPSLILLTDDAANRGLAAEQGIVAVSAREYVDGLESAEREKLVDLVV
GGVDEIEVVERRSRRIYPDYLPQDTLLAGVKTGHYHQGHFNANQYNYLEGTVNVPGLVKP
VLLVGRQAMNRSVNGDVVVVEIFPESEWKAPGEEVVDQDIALRDDDVEDDESGGVADKEF
VKEKQERLETEDAKKNKKEILPTGRVVGIVKRNWRAYVCHLDRSSLSDSAFTSLAQQTVF
ATPLSRALPRIRLRTRQAPQLVDQKILVTIDNWYPTSRYPDGHFVRALGKVASKEAEQES
LLLEYEVPYRPFGKAILNCLPPEGDNWVVPKKDMECLEWRDREDLRGLDICSIDPPGCQD
IDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYLVDKRIDMLPSLLG
TNLCSLRPFVERLAFSVIWELNEDAEVVDVRFVKSVIASKEAFTYEAAQLRKDDKSMNDQ
LTNSIRLLNHLAIKLKAARMRAGALSLSSPELKIHLASSESAEPINVEQKKLLETNSLVE
EFMLLANIWVAKKIQEVFPATAVLRRHSPPPKTNFEVLQDILIKRKGIALDVSTSKALAD
SLDACVIAGEPEFNTLVRIMATRCMLSAEYFCSGSVSKESYGHYGLASPIYTHFTSPIRR
YADVLAHRQLAAAINYTPLHPSLQSKSHVERILSTVNKRHRLAQMAGRASVEFYVSLTLK
GKGTGEEIGVRRKEEAWVVRTFKNGLAVFVPKLGLEGLVTFQKELHTYDAENYTISIPSP
SGEVVVAVFDKIMVDISIEKDENTQRGKVKMVMVEPVDSDTL
NT seq 3009 nt   +upstreamnt  +downstreamnt
atggcagctgtgaagtcgcatccccccatcaccatcctcaagcgcacacgagaggaccaa
catctttctcaaaataaatttctcaagaaaacagtaaggggaaaggtcataaacatcttc
cgagaacgatatgtccgtgatgatattccatgtggataccaggactgccatcaatgttca
caattcccagggtacaagcctgtcctccccaggaccggatttctacaacacacgaagttt
gcagggaatggccactacctcgtcattgacaccaacattgtgctccaccagatggacttg
ctgcagtctcttccggcacagctcccactcatcatcccctccaccactatccgcgaaaca
cgacatcgctctcttcccttatacaatcgcctccaacagcttattcaggatgaagatcgt
ctcgtctgggtttggtggaatgaagaacgccgcgagactgctactgttcgggaggtagat
gaagagcatggtagggaaaaaatcaacgaccgtaatgaccgagcgatccgccagaccgtc
ctcttttacgccgatcacttgtcccaactcacttccaacgcaccttctctcatcttactc
accgatgatgcggccaaccgcgggcttgccgccgagcagggaattgtggctgttagtgca
agggagtacgttgacggcctggaatcggctgagcgagagaaacttgtcgacctcgttgta
ggtggtgtggacgaaattgaggttgtcgagcgccgaagtcgccgtatttaccccgactat
ctccctcaggatacactccttgctggtgtcaaaacaggacattatcaccaaggtcacttc
aacgcgaaccagtacaattaccttgaaggcactgttaacgttcctgggcttgtaaaacct
gtcttgttggtgggtaggcaagcaatgaacagaagtgtcaatggcgatgtcgtcgtggtt
gagatcttccccgaatctgagtggaaagcgcccggagaagaggttgttgatcaggatata
gcgttgagggatgatgatgtggaagacgacgagagtgggggagtagccgataaggaattt
gtcaaggaaaaacaggaaaggttagagacggaagatgctaagaagaataagaaagagatt
ctgcctacaggtcgagttgttggtattgtcaagcgtaactggagggcatacgtatgtcat
cttgatcgttcatctctctctgactcagcatttacttccctcgctcaacaaacagtcttc
gccactcctctctctcgtgctcttccccgtatccgtcttaggactcgccaagctccccag
ttggtggaccaaaaaattctcgtcaccattgacaactggtaccccacctcccgttatcct
gatggccattttgttcgtgcgctaggtaaagttgcctccaaagaagcggagcaagagtcc
ctactccttgaatacgaggttccatatcgacctttcggtaaagctatcttgaactgtctc
ccacccgagggagataattgggtcgtccccaagaaggatatggaatgtttggagtggagg
gatagagaagacttgagaggtttggatatctgcagtattgatccccctgggtgtcaggat
atcgatgatgcgctacatgcgaggaggttgccgaatggtaatatcgaagctggtgtccat
atcgccgatgtgtctcactttgttcaccccgacaatccgatggattctgaagccgcatcc
cgtggtaccactgtgtacctcgtcgacaagcgaatcgatatgcttccttctttattaggt
accaatctttgctcattgaggccatttgtggagaggttggcctttagtgtcatttgggaa
ttgaacgaagatgcggaagtcgttgacgtgagatttgtcaagagtgtgattgcgtccaaa
gaggcgtttacgtacgaagccgctcagttgcgcaaagatgataaatctatgaatgaccag
ctcacaaactcgatccgccttctcaaccacctcgccattaagctaaaagccgctcgtatg
cgtgccggtgccctctctctctcctctcccgagctcaagatccacctcgcttcatctgaa
tctgctgagcccatcaatgtcgagcaaaagaaacttcttgaaacaaatagtcttgtagaa
gagttcatgctgctcgccaatatctgggtggccaagaagatccaggaggttttcccggct
actgctgtgctgagaagacattctccgccaccaaagaccaatttcgaggtgctgcaggat
atcttgataaaaagaaagggaatagcgcttgacgtgtccacctccaaggctttggccgac
tcccttgatgcttgcgttattgccggagaaccagaattcaacactcttgtaaggattatg
gctacgcgatgcatgctttcggcagagtatttctgttctggaagtgtatccaaggagtct
tacggacattacggtttggccagccccatctacacccattttacttccccaattcgtcga
tatgccgacgtccttgcgcaccgccaactggccgcggccatcaattacactcccctccac
ccttctcttcaatccaaatcccacgtcgaaagaatcttgtccactgtcaacaaacgacat
aggctcgcgcaaatggcaggaagggcgagcgtggaattctatgtcagtctgactttgaag
ggtaagggtactggtgaggaaattggagtgaggaggaaggaagaggcatgggtcgttagg
acattcaaaaatggtctggcagtgtttgttcccaagctcggcttggaggggcttgtcact
ttccagaaggagttgcatacctatgatgctgaaaactacaccatctccatcccttctcca
tctggtgaggttgttgtagcggtgtttgataaaatcatggtagatatctcaatcgagaag
gatgaaaacactcaaagaggcaaggtaaagatggtcatggtggagcctgttgactccgac
accctgtaa

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