KEGG   Cryptococcus gattii: CGB_K2410C
Entry
CGB_K2410C        CDS       T02232                                 
Name
(RefSeq) pre-mRNA splicing factor CEF1 (PRP19-associated complex protein 85)
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cgi  Cryptococcus gattii
Pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_K2410C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgi03041]
    CGB_K2410C
   03400 DNA repair and recombination proteins [BR:cgi03400]
    CGB_K2410C
Spliceosome [BR:cgi03041]
 Complex B
  Other components
   Prp19 complex
    CGB_K2410C
 Complex C
   Prp19-CDC5 complex
    CGB_K2410C
DNA repair and recombination proteins [BR:cgi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CGB_K2410C
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 10185252
NCBI-ProteinID: XP_003196718
UniProt: E6RDL6
LinkDB
Position
K:complement(join(539188..539283,539335..540647,540699..541334,541388..541667,541719..541826,541879..541959,542014..542016))
AA seq 838 aa
MRVIVKGGVWRNTEDEILKAAISKYGKNQWARISSLLVRKTPKQCKARWYEWLDPSIKKV
EWSKTEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDDAEARDNEELGLGAGE
DESSKPAADARGLRPGEIDTDPETRPARPDPIDMDDDEKEMLSEARARLANTQGKKAKRK
ARERQLEEARRLAFLQKKRELKAAGINLRAKPKKKGMDYNADIPFEKQPAPGFYDVTEEQ
AKVYAAPVGSTLRALEGKRKQELDEIEERKKRQKKGDGKSNQTQQFVAAREAQIKKLKEQ
EQIIRRRKLNLPMPQVGERELEDIVKIGQAGELARELVGEGNKATEGLLGEYEALGQAKM
ARTPRTAPQQDNVMAEARNLRNMMAAQTPLLGEENTPLHGPSAGTGFEGATPRHDVAATP
NPLAISARGGVPISTRTVPGVGTTPLRTPFRDDLSINDDASVYNETPMNEKRRLADSRRA
LKAGFAALPKPENNFELAETEEDEEEAEEAEPLTEEDAAESDARLKAAREEEERRELERR
STVIKKGLPRPVNVNTYKLLEDLNSAVVEQIDEEMAAAFKLVNLEVAMLMKHDSIAHPLP
GTSIPGGLASEYDMPEDDFVAEAKKAIHTELANALGLPGASDEHLRLAIGAAAEENESAF
AEAWAKEREGLVYFPSTRTWVDKTSLSPEELSACYAAMINASRDRVIAEATKAAKAEKKL
GKQLGGYQTLNEKAKKAIADVMEEIHQTKRDVETFLMLKGIEEAAAPARLEKIRGEVAVL
ERRERDLQARYAELNDRRRENLAAIEQLEEDKLVLAAQAALEAQEREVADGDIDMNGA
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgcgggttattgtcaagggcggtgtttggagaaacaccgaagatgaaattctcaaggcc
gctatctcaaaatacggtaagaatcaatgggctcgtatctcatcacttttggttcgaaaa
acacccaagcaatgtaaagcgagatggtacgaatggttagacccttcaatcaagaaagtg
gaatggtcgaagactgaggacgaaaagcttctccatcttgccaagctcatgcctactcaa
tggagaaccattgctcctatcgtcggtcgcactgctacacaatgtcttgagcgataccag
aaactcctggatgatgcggaggcgagggacaatgaagagttgggattaggagcaggagag
gatgaatcgagtaaaccagctgccgatgctagaggcctcaggccgggagaaattgacaca
gaccccgagacaagaccagcgaggcctgatcccatcgacatggatgatgacgagaaggaa
atgttatcagaagcgcgagcgagattggccaatacacaaggcaagaaagccaagcgcaag
gcccgagaaaggcaattggaagaggccaggcgactagctttcttacaaaagaagcgtgaa
ttgaaagccgctggtattaatcttcgtgccaagccgaagaagaagggtatggattacaac
gccgacatacctttcgagaagcagcctgctcctggtttctacgatgtcacggaagagcaa
gctaaggtttacgctgctcctgtcggttcaacacttcgggccctcgagggaaaacgcaag
caggagctggacgagattgaagagaggaagaagcgacagaagaagggagacggcaagtct
aaccaaacacagcaatttgtggcggcccgagaagcgcagatcaaaaaactcaaggagcaa
gaacagattatcaggaggaggaagctaaatttgccgatgcctcaggttggagaacgagaa
ctggaagatattgtcaagatcggacaagcaggagaattagcgagggagttggttggtgag
ggcaataaggcgacagagggtttgctaggcgaatacgaggctttgggccaggccaagatg
gctaggacaccaagaacagctcctcaacaggataatgtcatggccgaggctcgaaatctc
cgaaatatgatggcagcacaaacacctcttttgggggaagagaacactcctctgcacggc
ccttctgcgggcactggattcgaaggggctacacctcgacacgatgttgccgcgaccccc
aatcctcttgcaatttctgctcgaggtggtgtgcccatttcaactcgaacagttcctggt
gttggtaccacccccctacgaactcctttccgagatgatttgagcatcaacgatgatgcc
tccgtgtacaatgagactcccatgaacgagaagcggcgccttgccgattctcgtcgagct
ttgaaggctggctttgcggccttgcccaaaccagaaaataactttgagcttgctgagaca
gaagaggatgaagaggaggctgaagaagcggaaccgctaacagaggaagatgctgcagag
agcgatgcgagattgaaggccgccagagaggaagaggagcgacgcgaacttgagaggaga
agtactgttataaagaagggtttgcctcgacccgtcaatgtcaacacatacaagcttctc
gaggatctcaactcggctgtggttgagcagatcgacgaggaaatggccgcagcgttcaag
ctcgtcaatcttgaagttgcaatgctcatgaagcacgactccatcgctcaccctctgcct
ggaacttcgatccctggtggtctggcttctgagtatgacatgccggaggacgacttcgtg
gccgaggcaaagaaggctattcatacagaattggctaatgcattgggcttacctggtgcg
agcgatgaacatttacgtttggcgattggcgcagccgccgaggaaaacgaatctgccttt
gcggaagcatgggccaaggaacgtgaaggtcttgtctacttcccttcaactcgaacttgg
gtcgacaaaacctctctttctccagaggagctatctgcatgctacgctgcaatgatcaac
gcttctcgggatcgcgttattgccgaggctaccaaagccgccaaagcagaaaagaagctt
ggtaagcaactgggtggttaccaaacacttaatgagaaggcaaagaaggccattgcggac
gttatggaggagattcaccagaccaaacgggatgtggagacattccttatgcttaagggc
atagaggaggccgcggccccggcgagattggagaaaattagaggggaggttgctgttttg
gagagaagagagagagatctgcaggctaggtacgcggagttgaacgacaggaggagggaa
aaccttgcagctattgaacagcttgaggaagacaagctcgttctcgctgctcaagcggca
ctggaggcccaagaaagagaggtcgcggatggtgatattgatatgaacggggcgtag

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