Cryptococcus gattii: CGB_L0360C
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Entry
CGB_L0360C CDS
T02232
Name
(RefSeq) rab guanyl-nucleotide exchange factor
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cgi
Cryptococcus gattii
Pathway
cgi04138
Autophagy - yeast
cgi04142
Lysosome biogenesis
cgi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
CGB_L0360C
04138 Autophagy - yeast
CGB_L0360C
04148 Efferocytosis
CGB_L0360C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgi04131
]
CGB_L0360C
Membrane trafficking [BR:
cgi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CGB_L0360C
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Sm_multidrug_ex
DMAC1_Dmo2
Motif
Other DBs
NCBI-GeneID:
10185435
NCBI-ProteinID:
XP_003196934
UniProt:
E6REJ4
LinkDB
All DBs
Position
L:complement(join(114504..114570,114631..114687,114780..115148,115224..115326,115386..115695,115755..115896,115958..116028,116079..117160,117207..117761,117802..117960,117998..118061))
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AA seq
992 aa
AA seq
DB search
MATVETLLASTKQRVTAILHHDDRLYVGMASGVLEVYAYSPPSPPQLVATRPLARRQLEQ
LAVLPVLNRLAVLADSAVTLYTLPSLDKAPPLPLPLPRPVHALAATTATAAYARDPPPDP
PGDLLVLGGRKKVVLYGASPGPFSDPWELPLPHSPRHIVFPPPAPALPESIHLQFTASAS
AILHLHPSSPAARLSIADLTTDPVPPAAPSSPSPPDADEQSGYGKGALSGLGGYVGLGAK
QPTPAGTHTVPGEVLLAREGVFYSSEGNYTRQRSIHWPYPPDGIVFANPYIYSILPSPHS
SPTVQIHLASTLSLRQTVPLPLPSTGSWTGICFSLISSPDSSPSPSPSPKLLIATYPTDK
SLQPQGSTIHLVSSPPLSSEIQHFLLNGRIDDVIGIVEATQLAPLTPLKILKAVQLFASG
AYQPAMELFVQHNVNPALVLSLFPKSISGGLGVGRDAWMELFGAPRGAQLGLEQEHESRE
SRGSQGEEEVHDKNGEQSIHSVIDTANNQNIDDAALEALLYFLSDRRQKLSGAISSLPSH
LPPESTLPALHALPPAALHALPSIPFTEMNPEELVRMAQVVYTALMRVYLKARPVLVGSL
CRIENWCDVKEVEGLLKEQNKFGDLIDLYQGKKMHRKALTMLHELAKDEDDKLDRYPPTI
SYLHKLGVPDLDLILEFSKWILEEDPAMGLTVFTGDEPEIISLPRDKITAFLSSIDRGAC
EGYLEYIIGMWGEEGAEFHDKLAELYMVDSRVREKESERESEREKENAYTKLLKFLNDST
HYRPYRVMNKLSGQEMPEARAILLGKMGKHEEALKIYVYRLQDYAAAESYCVKAYQSNNN
VFLLLLQLYLRPPPPSPSKSKSGSGSTHLPPALSLISKHSSSLPASSVLDLLPPLVSISD
VHPFFINTLREEHRRKREGRVMRQLGKGRKEEVEGMLMGLEVKRVRVTDQRICPQCHKRL
GMSAIAVHAPRGEVTHLHCKDKFSAELAASRD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtggagacgctgctggcgagcacgaagcagcgtgtgactgcgatcctccac
cacgacgaccggctgtacgtcggtatggcgagcggtgtgctcgaggtgtacgcgtactcg
ccgccgtcgccgccgcagcttgtcgccacacggcccctcgcccgacgccagctggagcag
ctcgcggtgctgcccgtgctgaaccgcctcgccgtgctcgctgactcggccgtcacgctg
tacaccctcccctcgctcgacaaggccccccccctccccctccccctcccccgccccgtc
cacgcgctcgctgccaccaccgccaccgccgcctacgcccgcgacccccccccggacccc
cccggggacctgctcgtcctcggcggccgcaaaaaggtcgtcctctacggcgcatccccc
ggccccttcagcgacccgtgggagctccccctcccccactccccccgccacatcgtcttc
cccccccccgcccccgccctccccgaatccatccatctccagttcaccgcctccgcctcc
gccatcctccacctccacccctcctcccccgccgcgcgcctttccatcgccgacctcacc
accgaccccgtcccgcccgccgctccctcgtccccctcaccccccgacgccgacgagcaa
agcggctacggcaaaggcgcgctgagcggcctcggcggctacgtaggcctcggcgcgaaa
cagccaacgcccgcaggcacgcacacagtccccggcgaagtcttgctcgccagagaaggc
gtgttctactcgtccgaaggcaactataccagacaaagatccatccactggccgtatccg
ccagacggtatcgtattcgcaaacccatacatctactctatcctgccgtcgccgcattcg
tcgcctactgtccaaatccacctcgcgtccacactatccctccgccagactgtgcctctg
ccgcttccatctaccggaagctggaccggtatatgtttctctctcatctcgtctcctgac
tcttctccttctccttctccttctcccaaactactcatcgcgacgtacccaacagacaaa
tccctccagccacagggaagcaccatccacctcgtctcctctccgcccctctcgtccgaa
atccaacacttcttgctcaacggacgtatcgacgatgtcatcggcatcgtcgaagccacc
caactggcccccctgaccccactgaaaatcctgaaagcggtacagttattcgccagcggg
gcataccaacccgccatggaactgtttgtccagcacaacgtcaaccccgccctcgtcctc
tcccttttcccgaaaagtatttcaggggggttgggcgtgggcagggacgcgtggatggag
ttgtttggagcgccgaggggcgctcagttgggtctcgagcaggagcacgagtcgcgcgag
tcgcgcgggtcacaaggggaggaagaggtacatgacaagaatggagaacagagtatacac
agtgtaatcgatacagcgaacaatcaaaatatcgacgacgcagccctcgaagcactctta
tactttctctccgaccgccgtcaaaaactctccggcgcgatatcctccctcccatcgcat
ctcccacccgaatccaccctccccgcactgcacgcactcccgcccgccgcgctgcacgca
ctcccgtccatcccgttcaccgagatgaacccggaagaactggtgcgcatggcacaagtg
gtgtacaccgctttgatgcgggtctacttgaaagcgaggccggtgttggtaggtagtctg
tgtaggattgagaattggtgtgatgtgaaggaagtggaggggttgttgaaagagcaaaac
aaatttggcgatttgatagatctttatcaagggaaaaagatgcatagaaaagcgcttacc
atgctacacgaactggcaaaagacgaagacgataaactcgatcggtacccacccaccatc
tcgtacctccacaaactcggcgtacccgatttagatcttatcctagaattttcgaaatgg
attttggaggaggatccggctatgggtctcaccgtgttcacaggggacgaacccgagatt
atatccctcccccgagacaagatcaccgccttcctctcgtccattgaccggggagcgtgt
gaggggtatttagagtatatcatcgggatgtggggggaggaaggggcggagtttcatgat
aagcttgcagagctttatatggttgattcaagagtgcgtgaaaaggagagtgaacgtgaa
agtgaaagggaaaaggaaaatgcgtatacaaagttgttaaagtttttgaacgattcgacc
cattataggccgtatcgcgtgatgaacaagctttcgggccaagagatgccagaggcaaga
gcgatccttttggggaagatgggtaaacatgaagaagcgctgaaaatctacgtgtaccgc
ttacaagattatgcggctgctgagtcgtactgcgtgaaagcgtatcagtcgaataacaat
gtctttctactcctcctccaactctatctccgtccccctccaccgtccccctccaaatcc
aagtccggatccggatccacacacttaccaccagccctctccctcatctccaaacactcc
tcctccctccccgcctcctccgtcctcgacctcctcccccccctcgtctccatctccgac
gtccacccattctttataaacaccctaagagaagaacaccggcggaaacgcgagggacgg
gtgatgagacagttggggaaagggaggaaagaggaggtggaagggatgttgatggggttg
gaggtgaagagagtgagagtgacggatcagagaatatgtccgcagtgtcacaagagatta
ggcatgtctgccattgcagtgcacgcaccgagaggcgaagtgacgcatcttcattgtaaa
gacaagtttagtgcagagctggctgcttcaagagattag
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