Cryptococcus gattii: CGB_L0470C
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Entry
CGB_L0470C CDS
T02232
Name
(RefSeq) DNA replication factor (activator 1 subunit)
KO
K10755
replication factor C subunit 2/4
Organism
cgi
Cryptococcus gattii
Pathway
cgi03030
DNA replication
cgi03410
Base excision repair
cgi03420
Nucleotide excision repair
cgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGB_L0470C
03410 Base excision repair
CGB_L0470C
03420 Nucleotide excision repair
CGB_L0470C
03430 Mismatch repair
CGB_L0470C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgi03032
]
CGB_L0470C
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_L0470C
03400 DNA repair and recombination proteins [BR:
cgi03400
]
CGB_L0470C
DNA replication proteins [BR:
cgi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CGB_L0470C
DNA Replication Termination Factors
ELG1-RFC complex
CGB_L0470C
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CGB_L0470C
DNA repair and recombination proteins [BR:
cgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CGB_L0470C
Check point factors
HRAD17(Rad24)-RFC complex
CGB_L0470C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_22
RCF1-5-like_lid
AAA_11
AAA_16
AAA_30
Mg_chelatase
RuvB_N
SLFN-g3_helicase
AAA_assoc_2
AAA_19
AAA_24
AAA_14
DEAD
AAA_28
AAA_2
ResIII
AAA_5
AAA_7
DUF815
bpMoxR
Cdc6_lid
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
10185462
NCBI-ProteinID:
XP_003196928
UniProt:
E6REK6
LinkDB
All DBs
Position
L:complement(join(147906..148070,148191..148366,148488..148608,148708..148828,148963..149115,149205..149330,149418..149497,149599..149677,149855..149925))
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AA seq
363 aa
AA seq
DB search
MSAFAPRSVAPIKDPKLQPWVEKYRPKTIDDVSSQDNTVAVLRKALASTNLPHMLFYGPP
GTGKTSTILALARQLFGPDLFRARVLELNASDERGISVVREKIKSFARETPRHASGVSSD
GKEYPCPPFKLIILDEADSMTQDAQSALRRIMETYSKITRFCLVCNYVTRIIEPLASRCS
KFRFKPLEQESTRARMEMIAENEGVQTDPGVLSLILELAGGDLRKAITYLQTAQRLHSSI
EPPTPVSALSIHEISGVVPEDLITDLLAAMGADRQTGIDPSLARGFDGVKIAVKRVEREG
WSVGQVLEQIHDALIPIPSIPAVQKSLAGIAIAECDKGLCEGGDEELQLLDCMLRIKDIM
GRP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcattcgccccgcgttcagtagctcctatcaaagatcctaaactccagccttgg
gtcgaaaagtatcgtccgaaaacgattgatgatgtctcgagccaggataatactgttgcc
gttcttcgaaaggcgttagcttcaaccaatttaccgcatatgctgttctatggccctcca
gggacgggaaagacgagtacgattttggctttggctcgacagcttttcggccccgacctc
ttccgtgcgcgagtgttagaattgaatgcctctgatgaacgaggtatttcagtagtaagg
gagaaaatcaagagttttgcgagggaaacaccgaggcatgcttcgggcgtatcttcagat
ggtaaagaatatccctgcccaccattcaagttgatcattctggacgaagcggactccatg
acgcaggatgctcaatcggcgttgagaaggattatggagacgtattcaaaaattactcga
ttttgtcttgtgtgcaattatgttactaggattatcgagcccctcgcgtcgagatgtagc
aagtttaggtttaaaccgctcgaacaggagagtacgagagcgagaatggagatgattgca
gagaatgaaggtgttcaaactgatcctggagtgctttcgcttatcctcgaacttgctgga
ggcgatttacgaaaagcgatcacatacctccaaacagctcagagattacatagctcaatc
gaaccacctacgcctgtatcagctctttccatacatgaaatatccggcgttgtcccagaa
gatctgatcacagatctcctcgctgcgatgggggccgataggcaaactgggatcgatcct
agcctggcaagaggatttgacggtgttaagattgctgtgaagcgagttgagcgcgaagga
tggagtgtagggcaagtgcttgaacagatccacgacgctctcatacccattccaagtatc
ccggcggtccaaaagagcttggccggtattgcgatcgcggagtgcgataagggattgtgc
gaaggaggcgatgaagagttgcagcttttggattgtatgttgagaattaaggatatcatg
gggagaccatga
DBGET
integrated database retrieval system
