Cryptococcus gattii: CGB_L3380W
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Entry
CGB_L3380W CDS
T02232
Name
(RefSeq) cleavage and polyadenylation specificity factor
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CGB_L3380W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgi03021
]
CGB_L3380W
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_L3380W
Transcription machinery [BR:
cgi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CGB_L3380W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CGB_L3380W
U7-dependent histone pre-mRNA processing factors
CGB_L3380W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
10185843
NCBI-ProteinID:
XP_003197111
UniProt:
E6REC1
LinkDB
All DBs
Position
L:join(717244..717506,717568..717613,717669..717760,717814..718151,718221..718651,718726..719022,719090..719344,719478..719619,719719..720035,720123..720278)
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AA seq
778 aa
AA seq
DB search
MIPRRHHFKPAPQPTVQVLQPPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGL
HPAQPGIGALPFIDELDWSTVDALLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATK
AIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAG
HVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKE
KEEQFTTLVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQR
GMRVYKTYVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFG
LSRDLLEEWAPDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGNIPRRLTVKEISFGA
HVDYAQNSKFIQEIGAQHVVLVHGEASQMGRLRAALRDTYAAKGQEINIHTPKNCEPLTL
TFRQERMVKAIGSLASTRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQG
VAISVDWAVVRWYLEGMYGEVEEGIDEEGKPAFTIMNGVQVVQISPTAVELRWKSSSSND
MIADSALALLLGIDGSPATAKLTASPNKHACNHSHSHSLSHSDLHSNTYPGDKSAKVVAS
NPEFERLRMFLEAHFGHVEGPNLRPPLAQGADGEKIENGENDKDGDDWLTMDVKLDNHTA
RIDLISMRVESESAELQKRVETVLEMALTTVKSLSQTFLGGGLDVDMVEKVEPGESDS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgataccaagacgccaccacttcaagccggctccacaaccaacagtacaagtcctccaa
cccccggacgaagatgccccttcactcacaattaccatgctcggcgcaggccaggaagtc
ggcaggtcctgctgtgtcatagagcacagaggaaagaaaattgtatgcgatgccggtcta
cacccagcacaacctggtataggagctctgccattcatcgatgaacttgattggtcgact
gtggatgcgttgttaattactcatttccatgtagaccatgcggctgctttgccttatatt
atggagaagaccaattttaaagatggtaacgggaaggtgtacatgacgcacgctacaaaa
gctatctatggattgactatgatggatactgtacgactaaatgatcaaaatccagacact
tccggtcgtctatacgacgaagctgacgttcagtcatcctggcaatccaccatagcagtt
gattatcatcaagatatcgtcatcgccggtggcctcagatttaccccctaccatgctggc
cacgtccttggagcgtccatgttcctcatcgagattgctgggttgaagatcttgtataca
ggagattattcacgagaggaggataggcatctggtgatggcggagattccacctgtgaaa
cctgatgtgatgatttgcgagagcacgttcggtgtgcatacattaccagataggaaggag
aaggaggagcagttcacaacgttagtcgccaatatcgtccgaagaggtgggcgatgcctc
atgcctatcccttcctttggaaatggtcaagaactcgcacttctccttgacgaatactgg
aacgatcaccccgaactccaaaacatcccggtctactttgcctcctccctcttccaacgc
ggtatgcgtgtttacaaaacctatgttcatactatgaacgccaatatccgatcgcgattc
gccaggcgagataacccatttgatttcaggtttgtcaaatggttaaaagatccccagaag
cttagggagaataagggcccatgtgtgatcatgtcttcacctcagtttatgagttttggg
ctcagtcgtgatttgctggaagaatgggcgccggattctaagaatggggtgattgtcact
gggtactctattgagggcactatggccaggactctcttaagcgaaccggaccacatcgaa
tcccttaaaggaggcaatatccctcgccgcctaacagttaaagaaatttctttcggcgct
cacgtcgattacgcccaaaattcaaaattcatccaagaaataggtgctcagcacgttgtc
ctcgtgcatggagaagcttcacaaatggggagattgagagcggcgttgagagacacgtat
gcggccaaggggcaggaaattaatatccatacgccaaaaaattgtgaacctttgactctt
acttttagacaagaacggatggttaaggctatcggatctttagcatccactagacctgaa
cacggtacctccgtcaaaggccttctcgtctccaaagacttttcctatactctcctctcc
cccgccgatttacatgatttcacgggtctttcgacgagcacgatcatccagaagcagggg
gtggcgataagtgtagattgggcggtggtgagatggtatttggaggggatgtatggggag
gtggaggaaggtattgatgaagagggcaaacctgcttttaccattatgaacggtgtccaa
gtggtgcagatatctccaaccgctgtagaactacgatggaaatcaagttcgagtaacgat
atgattgccgattcggctttggcattgttgttgggtatagatgggagccctgccacagct
aagctcaccgcatcacctaacaaacacgcctgtaaccattcccattcccactcactctcc
cattccgacttgcattccaatacctacccgggcgacaaatccgccaaggtagtggcttcc
aaccccgaattcgaaagattacgcatgtttcttgaagcgcatttcggacatgtagaggga
ccgaatttgagaccaccccttgctcaaggagcggatggggagaaaattgaaaatggggag
aacgataaggacggggacgactggttgactatggatgtgaagctagataatcacacagcg
cggatagatctgatttctatgcgcgtggagtctgaatcagctgagcttcagaaacgtgtg
gaaacagtattggagatggcgttgacaactgtcaagtctctgtcacaaacttttttggga
gggggcctggacgttgatatggtggagaaggtggagcccggtgagagtgatagttga
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