Cryptococcus gattii: CGB_M1300C
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Entry
CGB_M1300C CDS
T02232
Name
(RefSeq) RNA binding protein
KO
K27407
RNA-binding protein VTS1
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_M1300C
04131 Membrane trafficking [BR:
cgi04131
]
CGB_M1300C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CGB_M1300C
Membrane trafficking [BR:
cgi04131
]
SNARE
SNARE associated proteins
Others
CGB_M1300C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
10186055
NCBI-ProteinID:
XP_003197278
UniProt:
E6RF64
LinkDB
All DBs
Position
M:complement(join(262007..262102,262160..262264,262336..263729,263775..263891,263949..264291))
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AA seq
684 aa
AA seq
DB search
MASHTLRPHRSPSPSPEPPVNLANPAKLTRQSLGPPTSGNSKGFGSLGLGPGLASPSSPS
QPRHVSSSVAMGMGNRESLSPRPSGIGSGRAVSATTGPRPSSEFIPTREAKTPETEQIDQ
WFKHLANWEATLEEMAAASTDQNFTEELGAIEQWFRVLSEAERTAALYSLLQYSTPVQIR
FFISVLHHMSQSDPMSALLSPSLSGNNSFQTQVESKLSNMNLKSPSAGGGAGFTGSPGNG
HYLAPDDAATKAAKARQNRISAPGTLQPHDRWQGQLDQVIERGTSPALESNISGRSRSKS
PTPEARPKSTDFSGKPRESLHRDSTAFPRSPRVSAGSPGIGLGIGRESPMASPFGNNASW
ASMVNTPLVQNYNDGKLTAPASVADLSHALNMATLQLNSPGYLPLDDARKYRRPAGGLAS
GQTSRNVSGQYNDDGEIVNPHTTQPGTSSGLLPNQFGTAGRSPLVDQFGLGSLGIGADAA
TLANLGLNYSLAGLGGVNPGLNGLTTAQAQAAQMLAMQQQLQNSPYSPFNTSVSSLQPGL
NPPRRGASRGQSSHINQHQQQHQPGRRSPNPMKSHSPAPGQQTGGGGAGGGAGVAGPEDV
DVRILEDVPNWLRVLRLHKYTPNFEKSNWNDMVLMTDQDLQDNGISAQGARTKFLKVFYN
VRTKMDITHPPGQEEYAPGPKDSK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccacaccctacgtcctcatcgctcaccctctccctctcctgaacctcctgtt
aaccttgccaacccggctaagcttactcgccaatcccttgggcctcccacatccggtaac
tcaaaaggtttcgggtccctcgggttgggccctggacttgcatctcctagctcccctagt
caacccagacacgtgagctcgtccgtcgctatgggtatgggaaacagggagagcttgagc
cccagaccaagcggtatcggtagcggaagggctgtttctgccactaccggtcctaggccg
agcagtgaattcattcctacccgcgaagccaagactcccgaaacggagcaaattgatcag
tggttcaaacatcttgctaactgggaagcgactcttgaagaaatggcggccgccagcact
gaccaaaactttaccgaagagcttggcgcgattgagcaatggttccgtgttctttccgag
gctgaacgtactgctgctttgtactctcttctccaatattccactccagtccagatccgt
ttcttcatctcagtgctccatcacatgtctcaatctgaccccatgtctgctctcctttct
cccagcctttccggtaacaactcgtttcagactcaggtagagtccaagttgtccaatatg
aacctcaagtccccttccgcaggcggcggggccggtttcactggctctccgggtaacgga
cactatctcgctccggatgatgcggcaacgaaggccgcaaaggcaagacagaaccgtatc
tctgcgcctggtacactccagccccacgacaggtggcaaggtcagcttgatcaagtgatc
gagcgaggtacatctccggctttggagagtaacatatctggccgtagccgaagcaagtcg
cccacccctgaagcccgacctaagtctactgatttttctggtaaacctcgagaatccctc
caccgtgacagcactgccttccctcgctcccctagagtttctgctgggagccccggtatt
ggtttgggtattggacgtgaatcccctatggctagcccattcgggaacaatgctagctgg
gcgagcatggtcaacacccccctcgtacagaattacaatgacggcaagctcaccgctccc
gctagcgtcgccgacctctctcacgctctcaatatggcgaccctccagctcaacagccct
ggttatcttcctcttgatgatgctcgcaaatatcgacggcccgctggtggtctcgcttct
ggccagacttcccgtaacgtctcagggcaatataacgacgatggtgaaattgttaacccg
cacactacccagcctgggacatcttctggcctcctacctaaccaatttggaacagcggga
cgttcgcctcttgttgatcagtttggtttgggcagtctgggtatcggtgccgatgccgcg
acgttggctaatctcgggttgaactacagccttgcagggctgggaggtgtgaatcctggt
ttaaacggtttgaccaccgcgcaagcccaagcggcgcagatgctagctatgcagcaacag
ctccagaactccccatattctccattcaacacttccgtatctagccttcagcccgggttg
aaccccccccgacgtggcgccagtcgaggccagtcttcgcacattaaccaacaccaacaa
cagcatcaacctggaaggcgaagtcccaaccctatgaagtcccactctcccgcacctggt
caacaaactggcggtggaggtgctggtggtggcgccggtgtagcagggccggaagatgta
gatgtgaggattttggaggatgtgcccaactggctgagagttctcaggttgcacaaatat
acgcccaactttgaaaagtccaattggaatgacatggtgttgatgacagatcaggatctg
caggacaatggtatctcagcgcagggtgcgaggaccaagttcctgaaggtattctacaat
gtccgaaccaagatggacattacccaccctccagggcaggaagaatatgctcctggaccc
aaagattccaaataa
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