Cryptococcus gattii: CGB_M3160W
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Entry
CGB_M3160W CDS
T02232
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgi03009
]
CGB_M3160W
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGB_M3160W
Ribosome biogenesis [BR:
cgi03009
]
Eukaryotic type
Pre-60S particles
Helicases
CGB_M3160W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
10186337
NCBI-ProteinID:
XP_003197356
UniProt:
E6RFG9
LinkDB
All DBs
Position
M:join(577879..577919,577976..578198,578247..578413,578463..578736,578782..579960)
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AA seq
627 aa
AA seq
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MFSKNNQPSDALLDADFSFSQPPFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKD
VLARARTGSGKTAAYVVPAVQKILEAKADLSPASAEYQATRAVILVPTKELALQVSSFIK
NVTKYCEGLVQCVDVAAGGSSIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSELSFLAI
DEADLLLSYGFKDDLTRIMDPTCGWIPKLGVQGCLMSATLSDDVEGIKGLILRNPAILTL
SEPAAASSLLTQHYTHTSERDKFLLIYVLLKLKLIRGKSIIFVNDVERGYRVKLFLEQFG
VKCCVVNSELPLASRYHVVEEFNRGVYDVIVATDEGAGADAEEEEDVKQEENESEEEEGE
DADEEAKDEEKETKGEAEPAAGPSKRRAASPPSKPNKRARRADPTSSLARGIDFTSASSV
INFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPREKWGKDKAVSIKSAEKDEKVFERIK
ERVKKESGSEIKEWDWGGRKGEIEGFRYRMEDALKAVTGKRVAEARREEVRRELLNSEKL
KSHFAANPLDLSYLRHDAPLHPTRQQTHLKHVPNYLMPKIAALPTGGDVTDHAGIGFSRR
GRGGHRGRGGRGGKSGRGKKVDPLKFK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaaaacaaccagccatccgacgcactacttgacgccgatttctctttttcc
caaccccccttttcaactctcatagattctcgagtcctggtagcccttgcagaccaaaag
tttgctcatccaactttagtacaggctaaggccatacctcttttgctcgaaggaaaagat
gttcttgcccgagctaggacaggaagcggtaagacagctgcctatgtagtcccagctgtg
cagaaaatcttggaggccaaagctgatctttcccctgcctccgcggagtatcaagctact
cgagctgtcattcttgtacccaccaaagagttggctttgcaagtttcttctttcatcaag
aacgtcaccaagtactgtgaaggtctagtgcaatgcgtcgatgttgctgcaggtggctct
agtatccaaagagtgcttctcaatgacaagcccgacatcgtcatctccacccctacaaag
cttctttccctcttgcagtctaaatccctctccctctctgaactttcgttccttgctatc
gatgaggcggatcttttgctttcatacggtttcaaggacgacctcaccagaattatggac
cccacctgcggatggatccccaagcttggtgtgcaaggttgccttatgagtgccaccttg
agtgacgacgtcgaaggtatcaagggtcttatacttcgtaaccctgccattctcactcta
tctgaacccgctgccgcctcgtctctcctcactcaacactacacgcacacttcggaacga
gacaagttcctccttatttacgtccttcttaagctgaaacttatacgcggtaaatcaatt
atctttgtcaatgacgtcgaacgcggctatcgagtcaaactcttcctcgaacaattcggt
gttaaatgttgtgttgtcaacagcgaattgcccttggcgagtaggtatcacgtggttgag
gagttcaacaggggtgtgtatgatgtcattgtggcgactgatgagggtgccggagccgac
gctgaggaagaggaagatgtaaagcaggaagaaaatgaatcggaagaagaggaaggcgaa
gatgcggacgaggaagccaaggacgaagagaaggagaccaagggagaagcagaacccgcc
gccggtccctccaaacgtcgggcggcctctcctccttctaagcccaacaaacgagcccga
cgcgcggaccctacctcttcgctcgctcgtggtatcgactttacctccgcatcttccgtg
atcaactttgatcttcctctcacctctacctcctacatgcaccgagtcggtcgtactgcc
cgagctggtcaatccggtctcgccctttcgttcgtcgtacctagagaaaagtggggtaag
gacaaggctgtatcaatcaaatcagcagagaaggatgagaaggtgtttgagaggatcaag
gagagggtgaagaaggaaagcggcagtgagatcaaggaatgggactgggggggcaggaag
ggggagattgaagggtttagatatcgaatggaggatgcgttgaaagcggttactggcaag
agggtggccgaagcgagaagagaagaagtcaggcgagagttgttgaacagcgaaaagctc
aaatctcactttgccgccaacccccttgacttgtcttacctccgacatgatgctcctctt
catcctacccgacaacaaacccacctcaaacatgtccccaactatcttatgccgaagatt
gcagcgctccctactggcggggatgtaaccgatcatgcaggcattggattttctagacga
ggaaggggaggccatagaggacgaggaggtaggggaggaaagagtggcaggggcaagaag
gttgacccgttgaagttcaagtag
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