Cryptococcus gattii: CGB_N1270C
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Entry
CGB_N1270C CDS
T02232
Name
(RefSeq) scavenger mRNA decapping enzyme DcpS (Hint-related 7meGMP-directed hydrolase)
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_N1270C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_N1270C
Enzymes [BR:
cgi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
CGB_N1270C
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
CGB_N1270C
3'-5' decay
Other 3'-5' decay factors
CGB_N1270C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
10186533
NCBI-ProteinID:
XP_003197512
UniProt:
E6RFY7
LinkDB
All DBs
Position
N:complement(join(244594..244857,244904..244998,245051..245222,245274..245394,245445..245641,245723..245953))
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AA seq
359 aa
AA seq
DB search
MPSETPAPLEITPALLVGFEPERILSESTMTGSTFIFGTLAGQQAIIHVQKTVMVGKDAE
DALKLLENVKLLLENAPYYSAHVWTKADPSNPDYIVKIICPATADHIKKYSIQERYVVRE
TAEVYEQLVRPYIEEMSISKIGWVFEILEGRKEAERVYYRSEGDDGFVILPDLKWDETTE
NALYLTCLVQDRSIKSLRDLKPSHIPLLKNIREKAAAEANRRFGVDAGKLRLFVHYHPTY
YHFHVHIVHIRHDNLFGQVAGQAHLLDDLISLLELSPADGPSLLARKSFTYTLGVEHRLF
PLMLKAGAVLGSPITITDAEAKAEPISATPVNPAVSTPSLGAAEPATDLEVPEAKRPRI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgaaactccagcccccctagagatcacacctgcgcttcttgtgggctttgag
ccagagcgaatcctctccgagtctacaatgactggctcgacatttatcttcggtacactc
gctggacagcaagctattatccatgtgcagaagactgtaatggttggaaaggatgcagag
gacgccctaaagcttcttgaaaatgttaagcttcttcttgaaaacgctccttattactct
gcccatgtgtggaccaaagcagacccgtccaaccccgattacatcgtcaagattatctgc
cctgccacagcagaccacatcaaaaagtactccattcaggagcgttacgtcgttagggaa
accgcggaggtatatgaacaactcgtgaggccttacattgaggaaatgtccatttccaag
atcggatgggtttttgaaattcttgaaggtcgaaaggaagccgaacgagtctactatcgt
tctgaaggtgatgacggtttcgtaattctccctgacttgaagtgggatgagaccacagaa
aacgccctttatctcacatgtctcgttcaagaccgcagcatcaagtctctccgcgacctg
aagccatcgcacattccccttttaaagaacattagggagaaggctgctgccgaagccaat
agaaggttcggtgtggatgctgggaagttgaggctgtttgtgcactaccaccctacttat
taccatttccacgtgcacattgtgcatatcagacatgacaatctctttggtcaggtcgct
ggtcaggctcacttgctcgacgatctcatctccctactcgaattgtctcctgccgatggc
ccctcacttctcgcccgaaaatcattcacctacactcttggagtcgagcacaggcttttc
ccactcatgctcaaggccggcgccgttctcggtagccccatcacaattaccgatgcagaa
gccaaagctgaacccatttctgccaccccagtgaaccccgccgtctcgactccttctctc
ggtgctgccgagcctgccactgaccttgaagtgccagaggcgaagcgtccccgcatttaa
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