Carassius gibelio (silver crucian carp): 127933289
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Entry
127933289 CDS
T08819
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127933289
09122 Translation
03013 Nucleocytoplasmic transport
127933289
03015 mRNA surveillance pathway
127933289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127933289
03041 Spliceosome [BR:
cgib03041
]
127933289
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127933289
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
127933289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
127933289
NCBI-ProteinID:
XP_052386110
LinkDB
All DBs
Position
A2:complement(22984908..22998986)
Genome browser
AA seq
1733 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTQH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDHEDHTEANDSIC
AAPNQDVAPSLADQHKGGTAVSGGFGVTGSESVELTEKETPGQPSPSTPAKPSAIASLSV
RVVDERGPTSSHVPADSDDGEGGDDNDDDEEEWNANVQRSRRAQPPKSQPVRERSGSSQQ
QQQPPPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGESPSRQRISSSSSSG
SSSSDSRSSSPEPAGDSTERRPGPLTLLARKMESEGAFSGAGKHDREGMDGQRSHHEGVV
SAIMHTANAASVLSYPSSVISNQGVGVVRSVMVEKSDGTKQVESSHLLWEQENKKRERPR
EQQRQLKALEKEKALEEERAQVLERERQEQEEALKRERALQRERVEKEKALQQAREEKEK
LEREQALERERERFEREQALERERQKKERLERERQEALERERLERERLEKERQEREQALE
RERLEKERLEKERQEREQVLERERLERERLEKERLEREQALERERLERERLEKERQEREQ
ALERERLERERLEKERQEREQVLERERLEREQLEKERLEREQALERERLERERLEKERQE
REQALERERLEKERLDREQALERERLERERLEKERQEREQVLERERLERERLEKERQERE
RQEKEQALERERQEKEKQEREQALEKERLERETALEKERQEMERAKEQERLEKEKALERE
RHEREAALERKRQEQDRIEKKKAEEERELALEKEREEQERALKEEQKRVQEEKETALKHE
KEEEREKERESCLPLLKRGRDIGGLSYPVPHAASLERPTEKPDESETGEPQSTGKDAGST
EPVPQQSPIAATQLSPQSSSKKSRFLRDRPLTTPLPSSPTSVLKRPRTFSDSPMPQAPSI
PLTLKSKEKDAAHVRQTSVLVSVPHELESKTLKVSAQTHAPQEEEKMETSEDSEASKDTK
RKTVRRVEDKEESPLPPPEEKKRGRVREKKEVEKKVSQSSSSSDSSSSDSDSGSSSSSHS
SSSSSSSEEEEKSHSTSDGRKSKVVQKDSSQATKKLGQTVAEKPPTAQRKKIVFTEQEEK
DMGNEDVIQTKKPCRELQDEKETRGRKDDIDEDDTNKDTTSVEVKEAVMAEPEKVPESSE
ESTTPKTFSARRISLGSSKPSPGVVSSEGEAEAASSAGAGRKRRWGSSTAVTAKKPSISI
TTDSLKSLIPDIKPALGQEAVLDLHPEEIQLSGEEDGGERGDQDLKIRRTVTQVVPSDTQ
ENGQKESKRSEDEEERSEGQDRMSQEEKMESSIQVSMETDPLSPGRDVDIKTVSPSDTLI
RRSISQQKSGVSVTIDDPVRTAKQPSPPRGKMSNIVHVCNLVRPFTLGQLKELLNRTGTV
VEDSFWIDKIKSHCYVTYSSAEEAMATRTALHGVKWPQSNPKFLNVDFCTQEELDFHRGL
GPAGEKPTEESRGAVAAGPGRPVPPPLLPERDQWAEREREMERRERARAEREWDRDKVRD
FSKAGEEREAGARRSRSRDRERRRKERGKSKERKTDKKEKVAEDPPAKLLDDLFRKTKAA
PCIYWLPLTEEQAAQRVAARAERMREREKRRKEMEEENKKREEEQREKVKTSVPTGGEGD
RDRDRERDRDRGREREREGDKRKEGYRRPGGNSASGSRRSRSRSDPPPRERRR
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacactggacgggaggccgctgcattcgctccgggtggcg
gatttgaaagcggcattggaagaaagagggcttccaaaaagcggacagaagaatgcactc
atcaagaggcttaaaggggctctcatgttggagaaccttcagaaaacctcaactcaacat
attggcctgcaacctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacctggccaaacagcaagagcttctcaggcagcggttggagagagaagcacgggag
gcagctgaaactgatggaacagaccatgaagaccacacagaggcaaatgacagtatttgt
gctgcccctaaccaggatgttgctccctcattagctgaccaacacaaaggaggtacagca
gtgtctgggggatttggggtgactgggagtgagagtgttgagctcacagaaaaagaaacc
cctgggcagccgtccccctccacacctgccaagcctagcgcaatagcctctttatctgtg
cgtgttgttgatgaaagaggaccaacttcaagccatgtaccagctgacagtgatgacggt
gaaggcggggatgacaatgatgacgatgaggaggagtggaacgccaatgttcaacggagc
cgtcgagcacagcctccaaaaagccaaccggtgagggaaagatctggtagctcacagcaa
cagcagcagccacccccccaacacatacctttactttcacagcagctcagacagcccact
cctcctccatcccctcctcctgaactctcttttccactcccagacacacctaaacagagc
ccacctagtcctggagagtccccgtctaggcagcgcatatctagttcttcaagctctggt
agttcaagtagtgacagtcgtagcagtagccctgaaccagcaggcgactccacagaacgc
agaccaggcccactgaccttactggcacgcaagatggagtctgagggagctttctctggg
gcaggaaagcatgatagggagggaatggatggacagagaagccaccatgagggggttgtg
tctgcaattatgcacactgctaatgcagcttcagttttgtcataccctagttcagtgatc
tccaaccaaggtgttggtgttgttaggtcagtgatggtggaaaagagtgatggaacgaag
caggttgagagtagccatcttttatgggagcaagaaaacaaaaagagggaaagaccacga
gaacaacagagacagctgaaagccctagaaaaggagaaggcattggaagaagagcgagca
caagttttggaacgggaaagacaggaacaagaagaagctctgaaacgtgagagggcttta
cagcgagaaagggtagagaaagaaaaggccttacagcaggcgagggaagagaaagagaag
cttgaaagagaacaagctttggaaagagagagagaacgattcgagagagaacaagctctg
gaacgagagaggcaaaaaaaggagcgactggagagagagaggcaggaagctttagagcgg
gagagattggagagagagaggctggagaaagaaagacaagaacgagaacaagccttagag
agggagagactcgagaaagaaagacttgagaaagaaagacaagaacgagaacaagttcta
gagagggagagattggagagagagcggcttgagaaggaaagactagaaagagaacaagct
ctagagagggagagattggagagagagcggcttgagaaggaaagacaagaacgagaacaa
gcgctagagagggagagattggagagagagcggcttgagaaggaaagacaagaacgagaa
caagttctagagagggagagattggaaagagagcagcttgagaaagaaagactagaaaga
gaacaagctctagagagggagagattggagagagagcggcttgagaaggaaagacaagaa
cgagaacaagcgttagagagggagagacttgagaaagaaagactagatagagaacaagct
ttagagcgggagcgattggaaagagagcgtcttgagaaggaaagacaagaacgagaacaa
gttttagagagagagcgattggaaagagagcgtcttgagaaggaaaggcaggaacgagag
aggcaggaaaaagaacaagctctagagagggagaggcaggagaaagaaaagcaagaaaga
gagcaagctttggagaaagagagactggaaagggaaactgctttggagaaagagagacaa
gaaatggagagggccaaagaacaggaaaggctggagaaagagaaggctttggaaagagaa
cggcatgaaagagaagctgctctcgaacgcaaaaggcaagagcaagacagaattgagaaa
aagaaagcagaggaagagcgagagctagctttggaaaaagagagagaagagcaggagagg
gctttaaaagaagagcaaaaaagagtccaggaggaaaaagaaacggctttgaaacatgaa
aaagaggaggaacgggagaaagaaagagaaagttgtcttcctctgttgaagcgtggtcgt
gatatcggtggtctttcctatccagtgccccatgctgcttctctggaacgtccaacagag
aagccagacgagagtgagactggtgaacctcagagcactggcaaagatgctggatctaca
gagcctgtcccacagcagtcacccatagctgcaacacaactgtctcctcaatcttcttct
aagaagtcccgcttccttagagatagacctctgacaactcctctcccatcctctccaact
tctgtgctgaagagacctcgcactttctcagatagcccaatgccacaagccccgtcaatt
ccattaacgttgaaatctaaggaaaaagatgctgctcatgtccgtcaaacatcagtcctt
gtttcagtccctcatgaacttgagagcaaaaccctcaaagtgtctgcccaaacacatgca
ccacaggaggaagagaagatggagacatcagaggatagtgaggcaagcaaagacactaaa
cgtaagacagtcagaagagttgaggataaggaggaatctcctttaccacctccagaggag
aagaaaagaggaagggtaagggaaaagaaagaggtggagaagaaagtcagtcagtcatca
tcctccagtgattcatcttcatccgattctgattctgggtcttcatcctcctcacactcc
tccagttcatcatcatcatcagaggaagaggagaaaagtcattcgacttcagatggtagg
aagtctaaagtggtccagaaagattcatctcaggccacgaaaaaacttggtcaaactgtg
gctgaaaagcctccaaccgcccaacgcaaaaaaattgtcttcacagagcaggaagaaaaa
gacatgggcaatgaggatgtcatacaaaccaagaaaccctgccgtgaactacaagatgag
aaggaaacaaggggaagaaaggacgatatcgatgaagatgacactaacaaagacactacc
agtgttgaggtgaaggaggctgtcatggcggagcctgagaaggttccagagagcagtgag
gagagcaccacgccaaagaccttctcggcccgaaggatttctctcggcagcagcaaaccg
tctcctggggtggtgagttcggagggagaagcggaggccgcaagcagtgctggtgctggc
aggaagagaagatggggctccagtacagctgtcactgccaagaaaccctccatcagtatc
accacagactctctgaagtctttaataccagacatcaagcctgctttgggtcaggaggct
gtgttagacctgcatccggaggagatacagctctccggggaagaggacggaggagagagg
ggagaccaagacctgaaaattaggcgaactgtaacacaggttgtgccctctgacacacaa
gagaatggacagaaagaatctaaaagaagtgaggacgaggaagaaagaagtgaagggcag
gatcggatgagccaagaggaaaagatggaaagctccattcaggtttccatggagacagat
ccgttgtcccccgggcgagacgtcgatataaaaacggtctctcccagtgacacactgatt
cggcgttccattagccagcagaagtcaggtgtgagtgtcaccatcgatgacccagtccgc
acagccaaacaaccctctcctcctcgtggcaagatgtctaacattgtccatgtctgcaac
ctggtgaggccgtttacgctggggcagttgaaggagctgttgaaccgcacagggactgta
gtggaggacagcttctggattgacaagattaaatctcactgttacgttacatactctagt
gcagaagaggcgatggccactcgtacagcactacatggggttaagtggccccagagtaac
cctaaatttctcaatgttgacttctgcacacaagaggagttggacttccacaggggtttg
ggtccagcaggcgaaaagccaacagaggagtctcgtggggcggtagctgctgggcctggc
cgtcccgtaccccctcctctcctaccagagcgtgatcagtgggcagaacgagaaagggaa
atggaaaggagggagagagctcgtgcagaaagagaatgggacagagataaagtgagagac
ttcagcaaagctggagaggagcgtgaagctggggccagaagatcacgttcacgagatcgt
gaaaggcggcgcaaggaaagagggaagagcaaagagaggaaaaccgataagaaagaaaaa
gtagcagaggatccacctgctaaactgctggatgacctcttccgcaaaaccaaagcggct
ccatgcatttactggctccccctcactgaggagcaggcagcacagagggtagcagctcgt
gctgagcgtatgagggaaagagagaagaggaggaaggagatggaagaggagaataagaaa
cgtgaggaggaacagcgagaaaaggtgaagactagcgtgcccaccggaggggaaggtgac
cgagaccgtgacagagaacgagatcgagacagaggtcgagaaagggagcgagagggggat
aaacggaaggagggataccgtaggcctggtggaaacagtgcaagcgggagcaggaggtca
cgaagccgcagcgaccctccaccaagagaacgacgacgctaa
DBGET
integrated database retrieval system
