Carassius gibelio (silver crucian carp): 127933435
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Entry
127933435 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1-like isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127933435
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127933435
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
127933435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127933435
NCBI-ProteinID:
XP_052386405
LinkDB
All DBs
Position
A17:complement(9376249..9410598)
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AA seq
1735 aa
AA seq
DB search
MMAESLNGVQLSTKWQDASNREAAILCYMGEQVPLIYCLEAEPQQGEEEQKVEERLLCPL
ECFLFGEDPCVGLEKLQQHSGCSSAQQCGRVFKEGETVYSCRDCAIDPTCVLCIECFQKS
VHKSHRYKMHASAGGGFCDCGDLEAWKTGPCCSQHDPGTSVNMETDECVMDPGLRERAQM
LFHLLLRYTTDMLVWEETNELSEELKPKVKQDTYFCVLYNDEHHSYDHVIYTLQRAIACD
QNQAQIYTALIDKEGRKAVKRGTLGSCQQAKDNIRRNSEHIIQKPLRVEILHTAVMAHQT
FALRLGAWFQKIFGYSVGLREVFCQVALEPAADNNNPCLISRLMLHDAKLYKGARKVVHE
LIFSSLLMDTEYKRQFAMKFTEHYKQLQEDFICDDHQRNISITALSVQIFTVPTLARQLI
EEGSVIKVIVDTVMDMMREHLDSNQRFHFQGHNPDKFFRVQVIFHDLRYILISKPSVWTE
TLREKFLEGLHVFLRFLCCMQGMEEVKRQLGQHVEVEPEWEAGFSLQMQLRYILAMFQDW
CSSDERVLLLAFQECHRALMSCTNQPFRSEPVDNYMCKQILHTRLYKVSQEPVSIHLPIS
RLLAGLYVLLCQTGAIQYLPDFVDTVQLNFTELAEQPLRCVVLAAQVCADMWRRNGLSLV
SQVYYYQDLKCRDEMFDKDIIMLQIAASKMDPNHFLMLVLLRFELFDIFNGNSSSKDQEV
LKQWNRLTEEMLYLIIVIVGERYVPGISHVTKEDVTMREVIHLLCIQPMAHSSLVKSLPD
NESHETWLETVVPKVAVFKKPGVSGHGLYELKKECLKEFNPFFYHYSRPQHSKAEEAQKK
RRTQEGSDKALRPPVPPPFCPGFSNIVYLLCCDIFIHILRRIFQKAVEDCSSRWTEPMIQ
RALHLVGQALLEEKTQLESNSTEEVTFDFSLKAQKTGSEHGKSLFHFLTKIKSLPSLKAQ
NDMITWNLQMFEVVKCLREKSGPVTSFSLDHSKMEECVQDKEKAERKRKAEAAKAHRQKI
MAQMSAMQKNFIESNKMLYDNVPESSSQSDTAASVESLDVDESRVAVGPQQGVCSTDWGP
QICILCQEEQEVQAQAPAMVLTACVQRSTVLTQDRGKTLSPEVGGYPLFMPPDLAVGTHT
GSCGHVMHATCWQKYFEAVQNTTRNRLHADLIIDLENGEYMCPLCKSLCNTVIPLIPVEP
SKLNYESAELVGQHLTLERWVQIMSSRIRGLRGTWETDKNCKEAAEEAMVLFDESQADFR
SILSFGVQEPPKFSRSITEMLGVCSTTVHRVGLQTAPNDLCPYVPVMSWNTCAYTIQAIE
SMLQEEGKALFGSLQNRQLSGLKALVQFSAFQRLKSRKAVIQKHFADMLAVLVPVPTVVN
APSILEVDFFHLLVGLILSIPALYQEEAVDLQPSAVSTAFNHLYLLHLVTMGHMLQVLLA
SHDCAVIRGPEEGDEAHAAAEIFSIMSQHTDGLRAGVSGFSVESVKRGVLPFLRCAALFF
NCLTGVPPPEELSGTAESPESQLPLLCSYLSLPSNLFQLFQEHRDVGITLIKRWCGNSAI
SKALKGESQIIRYPRKRNRLIDLPEDYSVLLNQASHFKCPNSSDDERKHPTLCLQCGVTL
CAQSPCCQQQLNGEEVGACTAHAAICGAGVGMFLRVRECEIILMASKTRGSPHPAPYLDD
YGETDPQLGRGNPLHLCPERYRKLLHMWQQHCVLEEIARSLELLNVMFPFEWQML
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagtcgctgaacggtgtacagttaagcacgaaatggcaggatgcttcaaac
agagaggctgccatactctgctatatgggggagcaggtcccccttatttactgcctggag
gcggagccacaacaaggggaggaggagcaaaaggttgaggaacgcctcttgtgtcctctg
gagtgcttcctttttggggaggacccctgtgtcgggctggagaagctacagcaacacagc
ggctgctcatcagctcagcagtgtggacgtgtctttaaagagggcgagaccgtctactcc
tgcagggattgtgcaatagatcccacctgtgtactttgcatagaatgcttccagaagagt
gtgcacaaaagtcatcgctacaagatgcatgcctcggcaggaggaggtttctgtgactgt
ggagacttggaggcctggaagactggaccctgctgctcccaacacgaccctggcacttca
gttaatatggaaacggatgagtgtgtgatggacccaggccttcgggaaagggctcagatg
ctgttccacctgctgctgcggtacacaacagacatgctggtttgggaagaaaccaacgaa
ctatcagaagagctgaagccaaaagtgaagcaagacacctacttctgtgtgctctacaac
gatgaacaccactcatatgaccacgtcatctacacacttcagcgcgcgatcgcctgtgac
cagaatcaggcccaaatctacactgctcttattgacaaggaagggcggaaagccgtgaag
agaggtactctcggatcctgccagcaagccaaggacaatatcaggcgtaactcggagcac
attatccagaaaccgttgcgggtggagattcttcacactgctgtaatggctcatcagacc
tttgccctcagacttggtgcatggttccaaaagatctttggctactcagttggcctcagg
gaggtgttctgtcaggtggctttggagccggccgctgacaacaataacccctgcctgatc
agtcgactcatgctgcacgacgccaaactttataaaggagcccgcaaggttgtccacgag
ttaatttttagtagtttactgatggacaccgaatataagaggcagtttgccatgaaattc
acagagcactacaagcaacttcaggaagactttatctgcgatgaccatcaaaggaacatc
tcaatcacagccttgtctgtgcagatcttcactgttcccactttggccaggcagttgata
gaggagggcagtgtcatcaaggtcattgtagacactgtaatggatatgatgagggaacat
ctggacagcaaccaacgcttccacttccagggccacaaccccgacaagttcttccgggtt
caagttatcttccatgacctcaggtacattttaatcagtaagccctctgtgtggactgag
acgttgagggagaagttccttgaaggtttacatgtctttcttcgcttcctatgttgtatg
caggggatggaggaggtgaagaggcagcttggtcagcatgttgaggtggagcccgagtgg
gaggcaggatttagcctccagatgcagctgcgctatattctcgccatgtttcaggactgg
tgctcttctgacgagagggttctgttgttggcctttcaggagtgtcacagagctctaatg
tcctgcaccaaccagcccttccgcagcgagccagtagacaactacatgtgcaagcagatc
ctccacacacggctttataaagtctcccaggagcccgtctccatccatctgcccatctcc
agactcctggccggtttatatgtgctgttgtgccagactggagcaatccaatacctccct
gactttgtggatactgtgcagctgaacttcactgagctggcggagcagcctctgcgctgt
gttgtgctggcggctcaggtgtgtgctgacatgtggcgcagaaacggcctgtcgctcgtc
agccaggtgtattactatcaggatcttaagtgcagggatgaaatgtttgataaagatatt
atcatgttgcagattgctgcttccaaaatggaccccaatcatttcctcatgcttgttctt
ttgagatttgaacttttcgatatttttaatggcaactcctccagtaaggatcaggaggta
ctgaaacaatggaataggttgacagaagagatgctttaccttattatcgtcattgtaggt
gagcggtatgtacctggaatcagtcatgtgactaaggaggatgtgactatgagggaggtc
atccatctgctttgtattcaacccatggctcatagcagcctggttaaaagcctgcctgat
aatgaaagccatgaaacatggcttgaaacggtcgtccctaaggttgccgttttcaagaaa
ccaggagtgtcaggccatggcttgtatgaattgaagaaggaatgtctgaaagagtttaac
cccttcttctatcattactccagaccacaacatagtaaggcagaagaggctcagaagaag
aggaggacccaagaaggcagtgataaagccctgcgtcccccagtgccccctcccttctgt
ccaggattctcaaacatagtgtatctgctctgctgtgacatcttcatccatattctgagg
cgaatcttccagaaagcagtggaggactgttccagccgatggactgaacccatgatccag
agggcactgcaccttgtaggacaggctctgctggaggaaaaaacgcagttggaaagcaac
agtactgaggaagtgacttttgactttagtctgaaagctcaaaaaactggttctgaacat
ggcaaatctttgttccacttcctgaccaaaataaagtctttaccttctctgaaagctcag
aatgacatgatcacatggaacttacagatgtttgaggtggtgaagtgtcttcgggagaaa
tctggtccggtaacttcattttctctggatcacagcaagatggaggagtgtgttcaggat
aaggagaaagccgagcggaagaggaaggctgaggctgctaaagcccacaggcagaagatc
atggctcagatgtcggccatgcagaagaacttcatcgagtccaacaagatgctttatgac
aacgtgcctgagagctcgagtcagagcgacaccgccgcttctgtggagagcttggatgtg
gatgagagcagagtggctgtggggcctcagcagggcgtttgttccacagactgggggcct
cagatctgcatcctgtgtcaggaggagcaggaagttcaggctcaggcaccagccatggtc
ctcacagcatgtgtgcagagatctactgttctcacccaggaccgtggaaagacactctcc
cctgaagtaggcggttatcccttgttcatgcccccagatttggcagtgggaacacacact
ggcagctgtggacatgtgatgcacgccacctgctggcaaaagtactttgaagctgtgcag
aacaccactcggaatcggctgcatgcagacctgatcatagacctggagaacggcgagtac
atgtgtccactctgcaagtccctctgtaacacggtcatccctctgatccctgtggagccc
agcaagctcaactatgagagtgcagaattagttggtcagcatctcactctggagcgctgg
gttcagatcatgtcttctcgaatcagagggctgagaggtacatgggaaacagacaaaaac
tgtaaggaagcagcggaggaagcaatggtactttttgatgagagtcaagctgatttcaga
tccattctcagttttggagttcaagagccgccgaagttctctcggagtatcaccgagatg
ttgggggtctgttcgaccactgtgcacagggtgggattgcagaccgctcccaatgacctg
tgcccatacgtgcctgtcatgtcctggaacacgtgtgcctacaccatccaggccatcgaa
agcatgttacaggaagaaggaaaggctctttttggatctctccagaacagacagctctct
ggactcaaagcgttagtgcagttttcagcttttcagaggctgaagagcagaaaagcagtc
atacagaagcattttgctgatatgttagcagtcctggtacctgttcctactgtagtaaat
gcaccatcaatattagaagtggacttctttcatctactggtggggctgattctgtccatc
ccagcattatatcaggaagaggctgtagacctgcagccttcagcagtcagcacagcgttc
aatcacctctacctactgcacctggtcactatgggacacatgctgcaggtcctgctggct
tcacacgattgtgctgtaataagagggccagaggagggcgatgaggcccatgctgcagct
gaaatcttctctattatgtctcaacacacagatgggttgagagctggtgtgtctggtttc
agtgtagagagtgtaaagagaggtgttcttcccttcctgcgctgtgctgcactgttcttt
aattgccttacaggagtgccccctccagaggagctgtctggtactgcagaatcacctgaa
agtcagctgcctctgctgtgtagttacctctccttgccctccaacctgtttcaactgttt
caggagcacagggatgttggaatcactttaataaagaggtggtgtgggaactcagccata
tccaaagccctcaaaggtgaaagccaaatcatcaggtatcctcgtaagagaaacaggctg
atagatcttccagaggactatagtgtgttgctcaaccaagctagtcactttaaatgccca
aactcatcagacgacgagcgaaagcacccgactctgtgtctgcagtgcggggtcacgctg
tgtgcgcagagcccatgctgtcagcagcagctgaacggggaggaagtgggagcgtgcacg
gctcacgccgccatctgcggggctggagtgggaatgtttctcagggttcgagagtgtgag
atcatcttgatggccagtaagacacggggcagtcctcatccagcaccttaccttgatgac
tatggagaaacagaccctcagcttgggcgtgggaacccgctgcacttgtgtccagagcgc
tatcgcaagctgcttcatatgtggcagcagcactgcgtcctggaggaaatcgcccgcagt
ctggagctcctcaacgtcatgttcccttttgagtggcagatgctttga
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integrated database retrieval system
